Pre_GI: BLASTP Hits

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Query: NC_016582:8031000:8043979 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 8043979, End: 8045286, Length: 1308

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003888:3138905:3145726314572631470901365Streptomyces coelicolor A3(2), complete genomesecreted protein2e-117422
NC_015953:2640500:2644763264476326460131251Streptomyces sp. SirexAA-E chromosome, complete genomeG-D-S-L family lipolytic protein2e-90332
NC_010572:5445081:5460330546033054616161287Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative secreted protein2e-83310
NC_016114:4614924:4629980462998046312421263Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeG-D-S-L family lipolytic protein2e-82306
NC_013929:66500:7330273302749421641Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein5e-71268
NC_010571:3903500:3916826391682639180731248Opitutus terrae PB90-1, complete genomelipolytic protein G-D-S-L family4e-63242
NC_016113:887582:8929518929518942131263Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencehypothetical protein4e-61235
NC_012483:30784:3546835468367031236Acidobacterium capsulatum ATCC 51196, complete genomeGDSL-like lipase/acylhydrolase family protein2e-59230
NC_011071:1773847:1790810179081017920661257Stenotrophomonas maltophilia R551-3, complete genomelipolytic protein G-D-S-L family9e-57221
NC_020418:3102460:3106126310612631072801155Morganella morganii subsp. morganii KT, complete genomehypothetical protein4e-44179
NC_013131:3222500:3237123323712332383131191Catenulispora acidiphila DSM 44928, complete genomelipolytic protein G-D-S-L family2e-31136
NC_013410:1591500:1620445162044516216021158Fibrobacter succinogenes subsp. succinogenes S85 chromosome,G-D-S-L family lipolytic protein7e-30132
NC_019673:2185005:2194875219487522003045430Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-1480.5
NC_007929:165518:1840641840641851971134Lactobacillus salivarius subsp. salivarius UCC118, complete genomehypothetical protein6e-1168.9
NC_014153:2282725:228765722876572288373717Thiomonas intermedia K12 chromosome, complete genomeLysophospholipase1e-0758.2