Pre_GI: BLASTP Hits

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Query: NC_016582:8031000:8037175 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 8037175, End: 8037516, Length: 342

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015953:2640500:265274026527402653078339Streptomyces sp. SirexAA-E chromosome, complete genomeChaperonin Cpn101e-49194
NC_016114:4614924:462304546230454623380336Streptomyces flavogriseus ATCC 33331 chromosome, complete genomechaperonin Cpn103e-49193
NC_010572:5445081:545349054534905453864375Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative GroES-family molecular chaperone1e-47188
NC_003888:3138905:315387031538703154226357Streptomyces coelicolor A3(2), complete genomeGroES-family molecular chaperone7e-43172
NC_013009:562470:578087578087578383297Neorickettsia risticii str. Illinois, complete genomechaperonin GroS7e-0856.2
NC_007798:547800:563368563368563664297Neorickettsia sennetsu str. Miyayama, complete genome10 kDa chaperonin7e-0856.2
NC_013209:1925341:192948619294861929857372Acetobacter pasteurianus IFO 3283-01, complete genomeheat shock protein GroES1e-0755.5
NC_017100:1929672:193047319304731930844372Acetobacter pasteurianus IFO 3283-03, complete genomeheat shock protein GroES1e-0755.5
NC_017108:1925323:192946819294681929839372Acetobacter pasteurianus IFO 3283-12, complete genomeheat shock protein GroES1e-0755.5
NC_017111:1925311:192945619294561929827372Acetobacter pasteurianus IFO 3283-32, complete genomeheat shock protein GroES1e-0755.5
NC_017121:1925323:192946819294681929839372Acetobacter pasteurianus IFO 3283-07, complete genomeheat shock protein GroES1e-0755.5
NC_017125:1929666:193046719304671930838372Acetobacter pasteurianus IFO 3283-22, complete genomeheat shock protein GroES1e-0755.5
NC_017146:1929678:193047919304791930850372Acetobacter pasteurianus IFO 3283-26, complete genomeheat shock protein GroES1e-0755.5
NC_017150:1833087:183723218372321837603372Acetobacter pasteurianus IFO 3283-01-42C, complete genomeheat shock protein GroES1e-0755.5
NC_010172:798923:806340806340806627288Methylobacterium extorquens PA1, complete genomechaperonin Cpn102e-0754.7
NC_007722:851129:859176859176859490315Erythrobacter litoralis HTCC2594, complete genomeheat shock protein groES5e-0753.1
NC_011565:385454:396513396513396788276Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,co-chaperonin GroES9e-0752.4
NC_014932:1232346:128300612830061283302297Bartonella clarridgeiae 73, complete genomechaperonin, 10 kDa1e-0652
NC_010475:2537500:255481225548122555123312Synechococcus sp. PCC 7002, complete genomechaperonin, 10 kDa protein1e-0652
NC_017249:3229500:325168032516803252081402Bradyrhizobium japonicum USDA 6, complete genome10 KD chaperonin1e-0652
NC_015675:6651899:666944466694446669836393Mesorhizobium opportunistum WSM2075 chromosome, complete genomeChaperonin Cpn101e-0652
NC_019973:6028795:604373360437336044125393Mesorhizobium australicum WSM2073, complete genomeCo-chaperonin GroES1e-0652
NC_010511:6067000:612231261223126122599288Methylobacterium sp. 4-46 chromosome, complete genomechaperonin Cpn102e-0651.2
NC_017249:7993713:805651480565148056828315Bradyrhizobium japonicum USDA 6, complete genomeGroES3 chaperonin2e-0650.8