Pre_GI: BLASTN Hits

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Query: NC_015957:5082172 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 5082172, End: 5104129, Length: 21958

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009921:38549693854969389148136513Frankia sp. EAN1pec, complete genome3e-89337BLASTN svgBLASTP svg
NC_015957:19600019600021778021781Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-34155BLASTN svgBLASTP svg
NC_015957:74084667408466745609947634Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-26129BLASTN svgBLASTP svg
NC_015957:88452748845274887561630343Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015957:73015467301546732710225557Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008699:1247423*1247423126898521563Nocardioides sp. JS614, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014217:45505444550544458915738614Starkeya novella DSM 506 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008578:22065002206500222474418245Acidothermus cellulolyticus 11B, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010572:40248104024810404598521176Streptomyces griseus subsp. griseus NBRC 13350, complete genome3e-0661.9BLASTN svgBLASTP svg