Query: NC_015957:3282183 Streptomyces violaceusniger Tu 4113 chromosome, complete genome
Start: 3282183, End: 3305811, Length: 23629
Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_009142:2565561 | 2565561 | 2589370 | 23810 | Saccharopolyspora erythraea NRRL 2338, complete genome | 0 | 908 | BLASTN svg | BLASTP svg |
NC_018750:5399316* | 5399316 | 5417126 | 17811 | Streptomyces venezuelae ATCC 10712, complete genome | 0 | 684 | BLASTN svg | BLASTP svg |
NC_021177:5697210* | 5697210 | 5721877 | 24668 | Streptomyces fulvissimus DSM 40593, complete genome | 0 | 660 | BLASTN svg | BLASTP svg |
NC_013235:1938889* | 1938889 | 1960080 | 21192 | Nakamurella multipartita DSM 44233, complete genome | 2e-127 | 464 | BLASTN svg | BLASTP svg |
NC_003155:5163382* | 5163382 | 5187458 | 24077 | Streptomyces avermitilis MA-4680, complete genome | 7e-112 | 412 | BLASTN svg | BLASTP svg |
NC_008269:868000 | 868000 | 910599 | 42600 | Rhodococcus sp. RHA1 plasmid pRHL1, complete sequence | 2e-72 | 281 | BLASTN svg | BLASTP svg |
NC_010617:1910388 | 1910388 | 1928876 | 18489 | Kocuria rhizophila DC2201, complete genome | 2e-69 | 272 | BLASTN svg | BLASTP svg |
NC_012792:385670 | 385670 | 409914 | 24245 | Variovorax paradoxus S110 chromosome 2, complete genome | 8e-53 | 216 | BLASTN svg | BLASTP svg |
NC_015957:5182460 | 5182460 | 5221284 | 38825 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 6e-35 | 157 | BLASTN svg | BLASTP svg |
NC_014532:2108897* | 2108897 | 2145168 | 36272 | Halomonas elongata DSM 2581, complete genome | 4e-27 | 131 | BLASTN svg | BLASTP svg |
NC_014165:2081914 | 2081914 | 2102115 | 20202 | Thermobispora bispora DSM 43833 chromosome, complete genome | 9e-25 | 123 | BLASTN svg | BLASTP svg |
NC_018681:867230* | 867230 | 901730 | 34501 | Nocardia brasiliensis ATCC 700358 chromosome, complete genome | 3e-24 | 121 | BLASTN svg | BLASTP svg |
NC_015957:10505870 | 10505870 | 10528082 | 22213 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
NC_007963:3225306 | 3225306 | 3253383 | 28078 | Chromohalobacter salexigens DSM 3043, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_008595:2687245 | 2687245 | 2728149 | 40905 | Mycobacterium avium 104, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_010572:4505428 | 4505428 | 4525227 | 19800 | Streptomyces griseus subsp. griseus NBRC 13350, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_021177:7815791 | 7815791 | 7838139 | 22349 | Streptomyces fulvissimus DSM 40593, complete genome | 8e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_013411:3314799 | 3314799 | 3358522 | 43724 | Geobacillus sp. Y412MC61, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_014915:3320768 | 3320768 | 3367923 | 47156 | Geobacillus sp. Y412MC52 chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_015683:2279904 | 2279904 | 2318652 | 38749 | Corynebacterium ulcerans BR-AD22 chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_018750:5078705 | 5078705 | 5102898 | 24194 | Streptomyces venezuelae ATCC 10712, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_014098:1553900* | 1553900 | 1576099 | 22200 | Bacillus tusciae DSM 2912 chromosome, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_015957:196000 | 196000 | 217780 | 21781 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_013510:39975* | 39975 | 62218 | 22244 | Thermomonospora curvata DSM 43183, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_008278:2972323 | 2972323 | 3016173 | 43851 | Frankia alni ACN14a, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_015434:3507059 | 3507059 | 3534326 | 27268 | Verrucosispora maris AB-18-032 chromosome, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_004337:3590323* | 3590323 | 3952993 | 362671 | Shigella flexneri 2a str. 301, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_010552:293703 | 293703 | 322599 | 28897 | Burkholderia ambifaria MC40-6 chromosome 2, complete sequence | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_013174:1459730* | 1459730 | 1482664 | 22935 | Jonesia denitrificans DSM 20603, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_018750:770500 | 770500 | 794378 | 23879 | Streptomyces venezuelae ATCC 10712, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_013947:3347174 | 3347174 | 3384115 | 36942 | Stackebrandtia nassauensis DSM 44728 chromosome, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_019892:7822000* | 7822000 | 7875720 | 53721 | Singulisphaera acidiphila DSM 18658 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_006087:2326143 | 2326143 | 2354219 | 28077 | Leifsonia xyli subsp. xyli str. CTCB07, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_020063:2343813 | 2343813 | 2366099 | 22287 | Enterobacteriaceae bacterium strain FGI 57, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_014831:1818968 | 1818968 | 1840099 | 21132 | Thermaerobacter marianensis DSM 12885 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_013595:891897 | 891897 | 911544 | 19648 | Streptosporangium roseum DSM 43021, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |