Pre_GI: BLASTP Hits

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Query: NC_015848:1647523:1647523 Mycobacterium canettii CIPT 140010059, complete genome

Start: 1647523, End: 1648434, Length: 912

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016768:2764000:278504927850492785960912Mycobacterium tuberculosis KZN 4207 chromosome, complete genomeoxpp cycle protein opcA2e-170598
NC_018524:5748421:575341957534195754339921Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeglucose-6-phosphate dehydrogenase subunit9e-61233
NC_002935:1315019:131669313166931317652960Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein1e-58226
NC_016783:1313008:131468213146821315641960Corynebacterium diphtheriae INCA 402 chromosome, complete genomeoxppcycle protein OpcA1e-58226
NC_016787:1276983:127980112798011280760960Corynebacterium diphtheriae HC03 chromosome, complete genomeoxppcycle protein OpcA1e-58226
NC_016788:1286974:128979212897921290751960Corynebacterium diphtheriae HC04 chromosome, complete genomeoxppcycle protein OpcA1e-58226
NC_016789:1334514:133618813361881337147960Corynebacterium diphtheriae PW8 chromosome, complete genomeoxppcycle protein OpcA1e-58226
NC_016799:1343020:134583813458381346797960Corynebacterium diphtheriae 31A chromosome, complete genomeoxppcycle protein OpcA1e-58226
NC_016800:1317276:131895013189501319909960Corynebacterium diphtheriae BH8 chromosome, complete genomeoxppcycle protein OpcA1e-58226
NC_016801:1333860:133551313355131336472960Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeoxppcycle protein OpcA1e-58226
NC_016802:1256287:129128212912821292241960Corynebacterium diphtheriae HC02 chromosome, complete genomeoxppcycle protein OpcA1e-58226
NC_016785:1270295:127196912719691272928960Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeoxppcycle protein OpcA1e-58226
NC_014643:2056280:209893220989322099918987Rothia dentocariosa ATCC 17931 chromosome, complete genomeoxppcycle protein OpcA2e-51202