Pre_GI: BLASTN Hits

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Query: NC_015733:5955467 Pseudomonas putida S16 chromosome, complete genome

Start: 5955467, End: 5987999, Length: 32533

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002947:61525006152500618549933000Pseudomonas putida KT2440, complete genome019630BLASTN svgBLASTP svg
NC_007384:40950164095016412229027275Shigella sonnei Ss046, complete genome0777BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome0785BLASTN svgBLASTP svg
NC_012560:5276000*5276000530340327404Azotobacter vinelandii DJ, complete genome0850BLASTN svgBLASTP svg
NC_021150:5234000*5234000526129527296Azotobacter vinelandii CA6, complete genome0850BLASTN svgBLASTP svg
NC_002947:61236086123608614375120144Pseudomonas putida KT2440, complete genome0886BLASTN svgBLASTP svg
NC_010501:111882518825Pseudomonas putida W619, complete genome01005BLASTN svgBLASTP svg
NC_009512:111886218862Pseudomonas putida F1, complete genome01072BLASTN svgBLASTP svg
NC_015740:45083754508375452814119767Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete01469BLASTN svgBLASTP svg
NC_008027:58427405842740587100528266Pseudomonas entomophila L48, complete genome02615BLASTN svgBLASTP svg
NC_007005:60567656056765608605229288Pseudomonas syringae pv. syringae B728a, complete genome06266BLASTN svgBLASTP svg
NC_007492:6372900*6372900643584362944Pseudomonas fluorescens PfO-1, complete genome06599BLASTN svgBLASTP svg
NC_010501:5735656*5735656577333937684Pseudomonas putida W619, complete genome017420BLASTN svgBLASTP svg
NC_009512:59209605920960595518534226Pseudomonas putida F1, complete genome019550BLASTN svgBLASTP svg
NC_009439:2427120*2427120248116354044Pseudomonas mendocina ymp, complete genome4e-157563BLASTN svgBLASTP svg
NC_002516:6255854*6255854627999924146Pseudomonas aeruginosa PAO1, complete genome3e-142513BLASTN svgBLASTP svg
NC_015410:26985722698572274463646065Pseudomonas mendocina NK-01 chromosome, complete genome3e-130474BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome7e-128466BLASTN svgBLASTP svg
NC_015572:49164304916430495009933670Methylomonas methanica MC09 chromosome, complete genome1e-126462BLASTN svgBLASTP svg
NC_015740:2692023*2692023271734525323Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-118434BLASTN svgBLASTP svg
NC_012560:5338707*5338707537299934293Azotobacter vinelandii DJ, complete genome2e-72281BLASTN svgBLASTP svg
NC_005966:159232*15923218289723666Acinetobacter sp. ADP1, complete genome1e-64256BLASTN svgBLASTP svg
NC_007492:43108284310828433716726340Pseudomonas fluorescens PfO-1, complete genome2e-63252BLASTN svgBLASTP svg
NC_002488:1099975*1099975114540245428Xylella fastidiosa 9a5c, complete genome1e-46196BLASTN svgBLASTP svg
CU928145:39585723958572397962121050Escherichia coli 55989 chromosome, complete genome2e-29139BLASTN svgBLASTP svg
NC_009778:41880004188000423044042441Enterobacter sakazakii ATCC BAA-894, complete genome2e-29139BLASTN svgBLASTP svg
NC_011748:39585723958572397962121050Escherichia coli 55989, complete genome2e-29139BLASTN svgBLASTP svg
NC_006677:1431500*1431500145622224723Gluconobacter oxydans 621H, complete genome8e-29137BLASTN svgBLASTP svg
NC_014323:50510415051041507664325603Herbaspirillum seropedicae SmR1 chromosome, complete genome3e-28135BLASTN svgBLASTP svg
NC_003295:19935419935423823938886Ralstonia solanacearum GMI1000, complete genome3e-28135BLASTN svgBLASTP svg
NC_010804:78222278222281165029429Burkholderia multivorans ATCC 17616 chromosome 1, complete1e-27133BLASTN svgBLASTP svg
NC_015222:386000*38600040759921600Nitrosomonas sp. AL212 chromosome, complete genome2e-26129BLASTN svgBLASTP svg
NC_010943:24659762465976248809922124Stenotrophomonas maltophilia K279a, complete genome5e-24121BLASTN svgBLASTP svg
NC_014910:75519275519280336548174Alicycliphilus denitrificans BC chromosome, complete genome5e-24121BLASTN svgBLASTP svg
NC_015565:27365002736500277293936440Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete2e-23119BLASTN svgBLASTP svg
NC_018750:5399316*5399316541712617811Streptomyces venezuelae ATCC 10712, complete genome7e-23117BLASTN svgBLASTP svg
NC_004757:230541*23054125274022200Nitrosomonas europaea ATCC 19718, complete genome1e-21113BLASTN svgBLASTP svg
NC_014210:397922*39792241759919678Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,7e-20107BLASTN svgBLASTP svg
NC_014363:114239*11423917409959861Olsenella uli DSM 7084 chromosome, complete genome3e-19105BLASTN svgBLASTP svg
NC_007517:16766041676604171020033597Geobacter metallireducens GS-15, complete genome1e-18103BLASTN svgBLASTP svg
NC_008554:3177723*3177723320256524843Syntrophobacter fumaroxidans MPOB, complete genome1e-18103BLASTN svgBLASTP svg
NC_021177:5697210*5697210572187724668Streptomyces fulvissimus DSM 40593, complete genome1e-18103BLASTN svgBLASTP svg
NC_019673:81143768114376813609921724Saccharothrix espanaensis DSM 44229 complete genome2e-1799.6BLASTN svgBLASTP svg
NC_013714:22038542203854222231018457Bifidobacterium dentium Bd1, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_010682:19139411913941193635322413Ralstonia pickettii 12J chromosome 1, complete sequence7e-1797.6BLASTN svgBLASTP svg
NC_008782:28578992857899289359935701Acidovorax sp. JS42, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_003919:4568892*4568892459309924208Xanthomonas axonopodis pv. citri str. 306, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_005125:2366778*2366778239059123814Gloeobacter violaceus PCC 7421, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_007951:4608560*4608560463659128032Burkholderia xenovorans LB400 chromosome 1, complete sequence1e-1593.7BLASTN svgBLASTP svg
NC_008027:38443553844355388629641942Pseudomonas entomophila L48, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_010407:20384992038499205674718249Clavibacter michiganensis subsp. sepedonicus chromosome, complete1e-1593.7BLASTN svgBLASTP svg
NC_013715:14459591445959146809922141Rothia mucilaginosa DY-18, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_013093:71746367174636719886524230Actinosynnema mirum DSM 43827, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_008541:3282415*3282415330766425250Arthrobacter sp. FB24 chromosome 1, complete sequence4e-1591.7BLASTN svgBLASTP svg
NC_008009:5139896*5139896517800338108Acidobacteria bacterium Ellin345, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_007508:4593446*4593446461871425269Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_011750:44905734490573451714226570Escherichia coli IAI39 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_011751:43739614373961440053726577Escherichia coli UMN026 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_013203:1447340*1447340147021422875Atopobium parvulum DSM 20469, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_015589:37118213711821375793046110Desulfotomaculum ruminis DSM 2154 chromosome, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_018720:18782011878201190278524585Bifidobacterium asteroides PRL2011 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_013446:28200002820000286592045921Comamonas testosteroni CNB-2, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_002927:5327094*5327094535399926906Bordetella bronchiseptica RB50, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_008027:2621443*2621443264643624994Pseudomonas entomophila L48, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_008618:1804610*1804610183073726128Bifidobacterium adolescentis ATCC 15703, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_008782:15100001510000154094730948Acidovorax sp. JS42, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_015422:28582282858228292680368576Alicycliphilus denitrificans K601 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_015733:42539614253961427610922149Pseudomonas putida S16 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_015379:35706583570658359449623839Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,4e-1281.8BLASTN svgBLASTP svg
NC_014963:40919104091910411615324244Terriglobus saanensis SP1PR4 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_008344:1*13873538735Nitrosomonas eutropha C91, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_008027:77589677589680259926704Pseudomonas entomophila L48, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_004556:531000*53100056678535786Xylella fastidiosa Temecula1, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_008027:3953951*3953951397851024560Pseudomonas entomophila L48, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_008027:4280000*4280000430482424825Pseudomonas entomophila L48, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_010577:530917*53091756659335677Xylella fastidiosa M23, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_011059:18965931896593192809931507Prosthecochloris aestuarii DSM 271, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_003909:4996783*4996783505271855936Bacillus cereus ATCC 10987, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_003997:5032969*5032969507209939131Bacillus anthracis str. Ames, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_004722:5194000*5194000525118457185Bacillus cereus ATCC 14579, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_005957:5037499*5037499507811440616Bacillus thuringiensis serovar konkukian str. 97-27, complete6e-1177.8BLASTN svgBLASTP svg
NC_006274:50858605085860510874322884Bacillus cereus E33L, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_007530:5033095*5033095507221139117Bacillus anthracis str. 'Ames Ancestor', complete genome6e-1177.8BLASTN svgBLASTP svg
NC_008027:4953432*4953432497941825987Pseudomonas entomophila L48, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_008600:5046000*5046000510070354704Bacillus thuringiensis str. Al Hakam, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_010717:4851000*4851000487555824559Xanthomonas oryzae pv. oryzae PXO99A, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_011772:5158680*5158680520959950920Bacillus cereus G9842, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_012472:50551845055184507809922916Bacillus cereus 03BB102, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_014335:49695494969549499246722919Bacillus cereus biovar anthracis str. CI chromosome, complete6e-1177.8BLASTN svgBLASTP svg
NC_015733:21946762194676221628521610Pseudomonas putida S16 chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_007404:13880491388049141186723819Thiobacillus denitrificans ATCC 25259, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_007908:11084941108494116189953406Rhodoferax ferrireducens T118, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_009052:50899635089963511024820286Shewanella baltica OS155, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_012912:47377034737703476071123009Dickeya zeae Ech1591, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_011768:4571869*4571869459528523417Desulfatibacillum alkenivorans AK-01, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_010501:4989455*4989455501446425010Pseudomonas putida W619, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_010501:4379920*4379920440315523236Pseudomonas putida W619, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_009512:31189073118907313838119475Pseudomonas putida F1, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_009512:755658*75565878272327066Pseudomonas putida F1, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_018697:1343756*1343756139248048725Cycloclasticus sp. P1 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_003296:55683655683661181954984Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete2e-0869.9BLASTN svgBLASTP svg
NC_012808:19205001920500194126820769Methylobacterium extorquens AM1, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_013037:55878025587802561018522384Dyadobacter fermentans DSM 18053, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_014973:24300024300026234519346Geobacter sp. M18 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015977:3324000*3324000334644022441Roseburia hominis A2-183 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_008319:20077522007752203322125470Synechococcus sp. CC9311, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_009092:4585784*4585784461549929716Shewanella loihica PV-4, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_009138:31535763153576318147527900Herminiimonas arsenicoxydans, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_010296:54000540007637922380Microcystis aeruginosa NIES-843, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_012029:1055890*1055890108175025861Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_012483:1408500*1408500144907040571Acidobacterium capsulatum ATCC 51196, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_015589:36629636629639209925804Desulfotomaculum ruminis DSM 2154 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_019897:329945*32994537695547011Thermobacillus composti KWC4 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_019903:3537545*3537545356034222798Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,6e-0867.9BLASTN svgBLASTP svg
NC_002607:332233227474271421Halobacterium sp. NRC-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007498:20878112087811212235934549Pelobacter carbinolicus DSM 2380, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007516:1974500*1974500199561621117Synechococcus sp. CC9605, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010364:332233227888275561Halobacterium salinarum R1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010498:41669034166903419347126569Escherichia coli SMS-3-5, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010814:15516241551624162182670203Geobacter lovleyi SZ, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011886:2950411*2950411298659936189Arthrobacter chlorophenolicus A6, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015733:1793399*1793399181802124623Pseudomonas putida S16 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015733:35958823595882362033824457Pseudomonas putida S16 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008027:2051821*2051821207333821518Pseudomonas entomophila L48, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_009512:15181131518113155588037768Pseudomonas putida F1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010501:25118872511887254627834392Pseudomonas putida W619, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012108:3965433*3965433398469319261Desulfobacterium autotrophicum HRM2, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015942:30902753090275311959929325Acidithiobacillus ferrivorans SS3 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015167:1154497*1154497118273428238Cellulophaga lytica DSM 7489 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_011883:2031222*2031222205221920998Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,4e-0661.9BLASTN svgBLASTP svg
NC_007298:219783*21978324447124689Dechloromonas aromatica RCB, complete genome4e-0661.9BLASTN svgBLASTP svg