Pre_GI: BLASTN Hits

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Query: NC_015275:3299923 Clostridium lentocellum DSM 5427 chromosome, complete genome

Start: 3299923, End: 3321268, Length: 21346

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010184:44256764425676444871923044Bacillus weihenstephanensis KBAB4, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014150:2088012*2088012212109933088Brachyspira murdochii DSM 12563 chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_016012:805680*80568082784122162Candidatus Arthromitus sp. SFB-rat-Yit, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014774:1120383*1120383115550835126Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete6e-0763.9BLASTN svgBLASTP svg
NC_015391:1323171*1323171134609922929Carnobacterium sp. 17-4 chromosome, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_003030:3763054*3763054378965126598Clostridium acetobutylicum ATCC 824, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015687:3766000*3766000379114625147Clostridium acetobutylicum DSM 1731 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012563:4101000*4101000412265321654Clostridium botulinum A2 str. Kyoto, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010520:3938490*3938490397609937610Clostridium botulinum A3 str. Loch Maree, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010674:11702641170264119243322170Clostridium botulinum B str. Eklund 17B, complete genome1e-29139BLASTN svgBLASTP svg
NC_010516:3903867*3903867395059846732Clostridium botulinum B1 str. Okra, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010723:1133163*1133163115110717945Clostridium botulinum E3 str. Alaska E43, complete genome4e-33151BLASTN svgBLASTP svg
NC_014393:49881274988127501003921913Clostridium cellulovorans 743B chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014328:4546390*4546390457009623707Clostridium ljungdahlii ATCC 49587 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_008593:37456*374566080623351Clostridium novyi NT, complete genome1e-0560BLASTN svgBLASTP svg
NC_021182:48824944882494490859926106Clostridium pasteurianum BC1, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_020291:12668851266885130737240488Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome2e-19105BLASTN svgBLASTP svg
NC_004557:81362*8136210417722816Clostridium tetani E88, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011661:961129*96112998426123133Dictyoglomus turgidum DSM 6724, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015557:1333158*1333158135835525198Hydrogenobaculum sp. 3684 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_020411:1333352*1333352135854925198Hydrogenobaculum sp. HO, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013798:345339*34533937221626878Streptococcus gallolyticus UCN34, complete genome3e-0661.9BLASTN svgBLASTP svg