Query: NC_015224:647341 Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,
Start: 647341, End: 674103, Length: 26763
Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria
General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_010634:635362* | 635362 | 657099 | 21738 | Yersinia pseudotuberculosis PB1/+, complete genome | 4e-70 | 274 | BLASTN svg | BLASTP svg |
| NC_006155:652500 | 652500 | 671705 | 19206 | Yersinia pseudotuberculosis IP 32953, complete genome | 4e-70 | 274 | BLASTN svg | BLASTP svg |
| NC_009778:3454790 | 3454790 | 3474780 | 19991 | Enterobacter sakazakii ATCC BAA-894, complete genome | 7e-69 | 270 | BLASTN svg | BLASTP svg |
| NC_020260:3457597 | 3457597 | 3480328 | 22732 | Cronobacter sakazakii Sp291, complete genome | 2e-60 | 242 | BLASTN svg | BLASTP svg |
| NC_014561:153143 | 153143 | 179999 | 26857 | Pantoea vagans C9-1 plasmid pPag1, complete sequence | 4e-55 | 224 | BLASTN svg | BLASTP svg |
| NC_012691:2050957* | 2050957 | 2068599 | 17643 | Tolumonas auensis DSM 9187, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_006155:3779381* | 3779381 | 3805594 | 26214 | Yersinia pseudotuberculosis IP 32953, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_010465:933488* | 933488 | 959099 | 25612 | Yersinia pseudotuberculosis YPIII, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_010634:3692321* | 3692321 | 3715958 | 23638 | Yersinia pseudotuberculosis PB1/+, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_015224:3892972* | 3892972 | 3936364 | 43393 | Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome, | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_005810:4045303 | 4045303 | 4068202 | 22900 | Yersinia pestis biovar Microtus str. 91001, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_015224:1514747 | 1514747 | 1540418 | 25672 | Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome, | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_010694:1052722 | 1052722 | 1084660 | 31939 | Erwinia tasmaniensis, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_010634:166900 | 166900 | 190179 | 23280 | Yersinia pseudotuberculosis PB1/+, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_006155:172313 | 172313 | 195599 | 23287 | Yersinia pseudotuberculosis IP 32953, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |