Pre_GI: BLASTN Hits

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Query: NC_015224:647341 Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,

Start: 647341, End: 674103, Length: 26763

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010634:635362*63536265709921738Yersinia pseudotuberculosis PB1/+, complete genome4e-70274BLASTN svgBLASTP svg
NC_006155:65250065250067170519206Yersinia pseudotuberculosis IP 32953, complete genome4e-70274BLASTN svgBLASTP svg
NC_009778:34547903454790347478019991Enterobacter sakazakii ATCC BAA-894, complete genome7e-69270BLASTN svgBLASTP svg
NC_020260:34575973457597348032822732Cronobacter sakazakii Sp291, complete genome2e-60242BLASTN svgBLASTP svg
NC_014561:15314315314317999926857Pantoea vagans C9-1 plasmid pPag1, complete sequence4e-55224BLASTN svgBLASTP svg
NC_012691:2050957*2050957206859917643Tolumonas auensis DSM 9187, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_006155:3779381*3779381380559426214Yersinia pseudotuberculosis IP 32953, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010465:933488*93348895909925612Yersinia pseudotuberculosis YPIII, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010634:3692321*3692321371595823638Yersinia pseudotuberculosis PB1/+, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015224:3892972*3892972393636443393Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,1e-0869.9BLASTN svgBLASTP svg
NC_005810:40453034045303406820222900Yersinia pestis biovar Microtus str. 91001, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015224:15147471514747154041825672Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_010694:10527221052722108466031939Erwinia tasmaniensis, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010634:16690016690019017923280Yersinia pseudotuberculosis PB1/+, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_006155:17231317231319559923287Yersinia pseudotuberculosis IP 32953, complete genome3e-0661.9BLASTN svgBLASTP svg