Pre_GI: BLASTN Hits

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Query: NC_015224:4314116 Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,

Start: 4314116, End: 4334543, Length: 20428

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015633:17020001702000172537323374Vibrio anguillarum 775 chromosome chromosome I, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_015380:412277*41227743518422908Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg