Query: NC_015224:4101939 Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,
Start: 4101939, End: 4121061, Length: 19123
Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria
General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_013421:4006085 | 4006085 | 4032785 | 26701 | Pectobacterium wasabiae WPP163, complete genome | 8e-145 | 521 | BLASTN svg | BLASTP svg |
| NC_013961:3413011* | 3413011 | 3436135 | 23125 | Erwinia amylovora, complete genome | 5e-140 | 505 | BLASTN svg | BLASTP svg |
| NC_010067:3310336 | 3310336 | 3364960 | 54625 | Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete | 7e-136 | 492 | BLASTN svg | BLASTP svg |
| NC_010658:4257310 | 4257310 | 4276186 | 18877 | Shigella boydii CDC 3083-94, complete genome | 2e-90 | 341 | BLASTN svg | BLASTP svg |
| NC_020181:3585898* | 3585898 | 3625898 | 40001 | Enterobacter aerogenes EA1509E, complete genome | 6e-81 | 309 | BLASTN svg | BLASTP svg |
| NC_007613:4119771 | 4119771 | 4138599 | 18829 | Shigella boydii Sb227, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_014153:2282725* | 2282725 | 2307255 | 24531 | Thiomonas intermedia K12 chromosome, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_009439:3394174* | 3394174 | 3419255 | 25082 | Pseudomonas mendocina ymp, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_006370:166000 | 166000 | 188675 | 22676 | Photobacterium profundum SS9 chromosome 1, complete sequence | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_003919:5023500 | 5023500 | 5046599 | 23100 | Xanthomonas axonopodis pv. citri str. 306, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |