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Query: NC_015224:4028150 Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,

Start: 4028150, End: 4048488, Length: 20339

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010159:12086991208699123266623968Yersinia pestis Angola, complete genome01354BLASTN svgBLASTP svg
NC_008150:41408044140804416050419701Yersinia pestis Antiqua, complete genome01354BLASTN svgBLASTP svg
NC_005810:43811824381182440352322342Yersinia pestis biovar Microtus str. 91001, complete genome01354BLASTN svgBLASTP svg
NC_004088:17977517977520177522001Yersinia pestis KIM, complete genome01354BLASTN svgBLASTP svg
NC_003143:41057544105754412910623353Yersinia pestis CO92, complete genome01354BLASTN svgBLASTP svg
NC_008149:39665863966586398859522010Yersinia pestis Nepal516, complete genome01346BLASTN svgBLASTP svg
NC_006155:42106064210606423298922384Yersinia pseudotuberculosis IP 32953, complete genome01338BLASTN svgBLASTP svg
NC_010634:41507634150763417017019408Yersinia pseudotuberculosis PB1/+, complete genome01338BLASTN svgBLASTP svg
NC_010465:52264952264954139418746Yersinia pseudotuberculosis YPIII, complete genome01314BLASTN svgBLASTP svg
NC_013716:4824541*4824541484830623766Citrobacter rodentium ICC168, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014718:232832*23283229223859407Burkholderia rhizoxinica HKI 454 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014121:31889283188928321328724360Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete9e-0660BLASTN svgBLASTP svg