Pre_GI: BLASTN Hits

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Query: NC_015224:279037 Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,

Start: 279037, End: 303668, Length: 24632

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015224:61080761080762877617970Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,1e-175624BLASTN svgBLASTP svg
NC_015224:4386599*4386599441050923911Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,3e-166593BLASTN svgBLASTP svg
NC_015224:2095816*2095816211873722922Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,5e-165589BLASTN svgBLASTP svg
NC_015224:27019142701914272426222349Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,8e-164585BLASTN svgBLASTP svg
NC_013421:4714478*4714478478002665549Pectobacterium wasabiae WPP163, complete genome1e-147531BLASTN svgBLASTP svg
NC_012912:44281114428111445683228722Dickeya zeae Ech1591, complete genome8e-127462BLASTN svgBLASTP svg
NC_010067:51000510007450923510Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete3e-68268BLASTN svgBLASTP svg
NC_015224:38203383820338386215341816Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-62248BLASTN svgBLASTP svg
NC_015224:10673901067390110671739328Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-62248BLASTN svgBLASTP svg
NC_004631:53125453125455515123898Salmonella enterica subsp. enterica serovar Typhi Ty2, complete5e-51210BLASTN svgBLASTP svg
NC_003198:2453074*2453074247785124778Salmonella enterica subsp. enterica serovar Typhi str. CT18,5e-51210BLASTN svgBLASTP svg
NC_006511:529424*52942455225122828Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC1e-48202BLASTN svgBLASTP svg
NC_008563:33321143332114335140519292Escherichia coli APEC O1, complete genome5e-45190BLASTN svgBLASTP svg
NC_008563:3888232*3888232390776619535Escherichia coli APEC O1, complete genome5e-42180BLASTN svgBLASTP svg
NC_007946:3855445*3855445387497119527Escherichia coli UTI89, complete genome5e-42180BLASTN svgBLASTP svg
NC_010634:33680003368000339029322294Yersinia pseudotuberculosis PB1/+, complete genome2e-41178BLASTN svgBLASTP svg
NC_006155:34564883456488347575719270Yersinia pseudotuberculosis IP 32953, complete genome2e-41178BLASTN svgBLASTP svg
NC_015224:35875003587500361767930180Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,3e-31145BLASTN svgBLASTP svg
NC_003143:33468343346834337009923266Yersinia pestis CO92, complete genome1e-30143BLASTN svgBLASTP svg
NC_004088:16229411622941164556522625Yersinia pestis KIM, complete genome1e-30143BLASTN svgBLASTP svg
NC_005810:29053622905362292838523024Yersinia pestis biovar Microtus str. 91001, complete genome1e-30143BLASTN svgBLASTP svg
NC_006155:30407693040769306409923331Yersinia pseudotuberculosis IP 32953, complete genome1e-30143BLASTN svgBLASTP svg
NC_006155:32127963212796323445221657Yersinia pseudotuberculosis IP 32953, complete genome1e-30143BLASTN svgBLASTP svg
NC_008149:15565811556581157548818908Yersinia pestis Nepal516, complete genome1e-30143BLASTN svgBLASTP svg
NC_008150:24518722451872247509923228Yersinia pestis Antiqua, complete genome1e-30143BLASTN svgBLASTP svg
NC_010159:28784992878499290014121643Yersinia pestis Angola, complete genome1e-30143BLASTN svgBLASTP svg
NC_010465:15506171550617157325522639Yersinia pseudotuberculosis YPIII, complete genome1e-30143BLASTN svgBLASTP svg
NC_004088:22272782227278224825620979Yersinia pestis KIM, complete genome4e-30141BLASTN svgBLASTP svg
NC_008149:1842500*1842500188064438145Yersinia pestis Nepal516, complete genome4e-30141BLASTN svgBLASTP svg
NC_008150:1705152*1705152174460539454Yersinia pestis Antiqua, complete genome4e-30141BLASTN svgBLASTP svg
NC_010159:22523802252380227191719538Yersinia pestis Angola, complete genome4e-30141BLASTN svgBLASTP svg
NC_010465:22828742282874230925826385Yersinia pseudotuberculosis YPIII, complete genome4e-30141BLASTN svgBLASTP svg
NC_015224:88953688953690956920034Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,4e-30141BLASTN svgBLASTP svg
NC_004088:11968751196875123427537401Yersinia pestis KIM, complete genome2e-29139BLASTN svgBLASTP svg
NC_005810:87267287267291210839437Yersinia pestis biovar Microtus str. 91001, complete genome2e-29139BLASTN svgBLASTP svg
NC_006155:11913071191307123066739361Yersinia pseudotuberculosis IP 32953, complete genome2e-29139BLASTN svgBLASTP svg
NC_008150:43737224373722439711823397Yersinia pestis Antiqua, complete genome2e-29139BLASTN svgBLASTP svg
NC_010159:12880001288000132559537596Yersinia pestis Angola, complete genome2e-29139BLASTN svgBLASTP svg
NC_010634:11754041175404121321037807Yersinia pseudotuberculosis PB1/+, complete genome2e-29139BLASTN svgBLASTP svg
NC_006155:35961203596120363277836659Yersinia pseudotuberculosis IP 32953, complete genome6e-29137BLASTN svgBLASTP svg
NC_008150:25996612599661262209922439Yersinia pestis Antiqua, complete genome6e-29137BLASTN svgBLASTP svg
NC_010159:409500*40950045168242183Yersinia pestis Angola, complete genome6e-29137BLASTN svgBLASTP svg
NC_010634:3269010*3269010329227823269Yersinia pseudotuberculosis PB1/+, complete genome6e-29137BLASTN svgBLASTP svg
NC_010634:35098803509880354653836659Yersinia pseudotuberculosis PB1/+, complete genome6e-29137BLASTN svgBLASTP svg
NC_003143:28493772849377287209922723Yersinia pestis CO92, complete genome2e-28135BLASTN svgBLASTP svg
NC_004088:18018191801819182425322435Yersinia pestis KIM, complete genome2e-28135BLASTN svgBLASTP svg
NC_005810:26134562613456263609922644Yersinia pestis biovar Microtus str. 91001, complete genome2e-28135BLASTN svgBLASTP svg
NC_008149:24111612411161243409922939Yersinia pestis Nepal516, complete genome2e-28135BLASTN svgBLASTP svg
NC_010159:18614651861465188409922635Yersinia pestis Angola, complete genome2e-28135BLASTN svgBLASTP svg
NC_010465:17240001724000174609922100Yersinia pseudotuberculosis YPIII, complete genome2e-28135BLASTN svgBLASTP svg
NC_010634:29600002960000298209922100Yersinia pseudotuberculosis PB1/+, complete genome2e-28135BLASTN svgBLASTP svg
NC_010634:31291743129174315220423031Yersinia pseudotuberculosis PB1/+, complete genome2e-28135BLASTN svgBLASTP svg
NC_003143:28045002804500282209917600Yersinia pestis CO92, complete genome4e-27131BLASTN svgBLASTP svg
NC_004088:1851500*1851500188954638047Yersinia pestis KIM, complete genome4e-27131BLASTN svgBLASTP svg
NC_005810:25496802549680258809938420Yersinia pestis biovar Microtus str. 91001, complete genome4e-27131BLASTN svgBLASTP svg
NC_010159:18185001818500183609917600Yersinia pestis Angola, complete genome4e-27131BLASTN svgBLASTP svg
NC_015224:14402831440283145849618214Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,4e-27131BLASTN svgBLASTP svg
NC_003143:87536787536791053535169Yersinia pestis CO92, complete genome1e-26129BLASTN svgBLASTP svg
NC_004088:35053833505383354055935177Yersinia pestis KIM, complete genome1e-26129BLASTN svgBLASTP svg
NC_008149:33732293373229340909935871Yersinia pestis Nepal516, complete genome1e-26129BLASTN svgBLASTP svg
NC_009788:16360163603711520756Escherichia coli E24377A plasmid pETEC_73, complete sequence1e-26129BLASTN svgBLASTP svg
NC_015224:3892972*3892972393636443393Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,6e-26127BLASTN svgBLASTP svg
NC_015224:3225000*3225000325159926600Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,6e-26127BLASTN svgBLASTP svg
NC_003143:31159333115933313845922527Yersinia pestis CO92, complete genome2e-25125BLASTN svgBLASTP svg
NC_004088:12657301265730129020024471Yersinia pestis KIM, complete genome2e-25125BLASTN svgBLASTP svg
NC_005810:12309761230976125037019395Yersinia pestis biovar Microtus str. 91001, complete genome2e-25125BLASTN svgBLASTP svg
NC_006155:29795002979500301649636997Yersinia pseudotuberculosis IP 32953, complete genome2e-25125BLASTN svgBLASTP svg
NC_008149:11956141195614122004824435Yersinia pestis Nepal516, complete genome2e-25125BLASTN svgBLASTP svg
NC_008150:28226892822689284340720719Yersinia pestis Antiqua, complete genome2e-25125BLASTN svgBLASTP svg
NC_010634:28946312894631293584741217Yersinia pseudotuberculosis PB1/+, complete genome2e-25125BLASTN svgBLASTP svg
NC_015224:17031301703130172897125842Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,9e-25123BLASTN svgBLASTP svg
NC_010634:28108152810815283272221908Yersinia pseudotuberculosis PB1/+, complete genome9e-25123BLASTN svgBLASTP svg
NC_006155:28938022893802291787224071Yersinia pseudotuberculosis IP 32953, complete genome9e-25123BLASTN svgBLASTP svg
NC_015224:32917363291736331359921864Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-22115BLASTN svgBLASTP svg
NC_003143:27784942778494279956221069Yersinia pestis CO92, complete genome2e-19105BLASTN svgBLASTP svg
NC_006155:32379903237990326294924960Yersinia pseudotuberculosis IP 32953, complete genome2e-19105BLASTN svgBLASTP svg
NC_008149:23373362337336236141524080Yersinia pestis Nepal516, complete genome2e-19105BLASTN svgBLASTP svg
NC_008150:22071982207198223127724080Yersinia pestis Antiqua, complete genome2e-19105BLASTN svgBLASTP svg
NC_010634:31557413155741318046024720Yersinia pseudotuberculosis PB1/+, complete genome2e-19105BLASTN svgBLASTP svg
NC_015556:819503*81950384290123399Pseudomonas fulva 12-X chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_015224:2061951*2061951208443822488Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,3e-18101BLASTN svgBLASTP svg
NC_008150:37119533711953374731835366Yersinia pestis Antiqua, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_008149:36481393648139368280234664Yersinia pestis Nepal516, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_010465:17907391790739181268021942Yersinia pseudotuberculosis YPIII, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_010159:17940001794000181359119592Yersinia pestis Angola, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_021066:1393750*1393750141908425335Raoultella ornithinolytica B6, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_010552:20891402089140211228223143Burkholderia ambifaria MC40-6 chromosome 2, complete sequence2e-1385.7BLASTN svgBLASTP svg
NC_007511:71949371949373920719715Burkholderia sp. 383 chromosome 2, complete sequence2e-1385.7BLASTN svgBLASTP svg
NC_002528:31191*311915005118861Buchnera aphidicola str. APS (Acyrthosiphon pisum), complete8e-1383.8BLASTN svgBLASTP svg
NC_015224:15147471514747154041825672Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,3e-1281.8BLASTN svgBLASTP svg
NC_008702:40644704064470409211327644Azoarcus sp. BH72, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008061:42850142850144790319403Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_008543:20352922035292205318117890Burkholderia cenocepacia HI2424 chromosome 2, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_010515:23581342358134238144223309Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_012880:2399205*2399205242050221298Dickeya dadantii Ech703, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015224:13910881391088142166930582Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,5e-1177.8BLASTN svgBLASTP svg
NC_010465:80424980424984108836840Yersinia pseudotuberculosis YPIII, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_005773:69499069499072559930610Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-1075.8BLASTN svgBLASTP svg
CU928160:1978500*1978500201443135932Escherichia coli IAI1 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_003143:39874839874842431625569Yersinia pestis CO92, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_003911:253400*25340027913725738Silicibacter pomeroyi DSS-3, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_007645:1245927*1245927126577919853Hahella chejuensis KCTC 2396, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_007760:47510004751000477056419565Anaeromyxobacter dehalogenans 2CP-C, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_008149:31886031886034352424665Yersinia pestis Nepal516, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_008150:1593500*1593500161559922100Yersinia pestis Antiqua, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_010634:2297000*2297000231809921100Yersinia pseudotuberculosis PB1/+, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_011901:62571262571266531339602Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete8e-1073.8BLASTN svgBLASTP svg
NC_012724:19147401914740194049525756Burkholderia glumae BGR1 chromosome 1, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_019973:2417000*2417000243959922600Mesorhizobium australicum WSM2073, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015675:2567000*2567000258988822889Mesorhizobium opportunistum WSM2075 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_006155:3779381*3779381380559426214Yersinia pseudotuberculosis IP 32953, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008149:3790897*3790897381416023264Yersinia pestis Nepal516, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010159:74181974181976361621798Yersinia pestis Angola, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010465:4222586*4222586424312420539Yersinia pseudotuberculosis YPIII, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010634:3692321*3692321371595823638Yersinia pseudotuberculosis PB1/+, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_003143:31912463191246321275521510Yersinia pestis CO92, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_005810:3021913*3021913304567123759Yersinia pestis biovar Microtus str. 91001, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008150:25747942574794259632821535Yersinia pestis Antiqua, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008785:91441191441194029125881Burkholderia mallei SAVP1 chromosome II, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_010465:14271701427170145224325074Yersinia pseudotuberculosis YPIII, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010557:67965667965674320963554Burkholderia ambifaria MC40-6 chromosome 3, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_010805:57570957570964147565767Burkholderia multivorans ATCC 17616 chromosome 2, complete5e-0867.9BLASTN svgBLASTP svg
NC_015224:17638481763848179825034403Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,5e-0867.9BLASTN svgBLASTP svg
NC_010086:18163781816378188976873391Burkholderia multivorans ATCC 17616 chromosome 2, complete5e-0867.9BLASTN svgBLASTP svg
NC_008150:4601202*4601202462030019099Yersinia pestis Antiqua, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010465:62348*6234810809945752Yersinia pseudotuberculosis YPIII, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014923:2439197*2439197246272623530Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_015224:44261674426167445165025484Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_015566:69190*691909503025841Serratia sp. AS12 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015567:69190*691909503025841Serratia sp. AS9 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003155:74539947453994748164227649Streptomyces avermitilis MA-4680, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_004347:1038253*1038253107053732285Shewanella oneidensis MR-1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_004347:3670145*3670145369364023496Shewanella oneidensis MR-1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_004347:40078474007847403509927253Shewanella oneidensis MR-1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_005810:3493607*3493607351772924123Yersinia pestis biovar Microtus str. 91001, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_006448:351998*35199837421022213Streptococcus thermophilus LMG 18311, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008027:2051821*2051821207333821518Pseudomonas entomophila L48, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014532:20660742066074209060724534Halomonas elongata DSM 2581, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012779:3570720*3570720359409923380Edwardsiella ictaluri 93-146, complete genome3e-0661.9BLASTN svgBLASTP svg