Pre_GI: BLASTP Hits

Some Help

Query: NC_015224:4426167:4450658 Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,

Start: 4450658, End: 4451650, Length: 993

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012214:3931824:394827639482763949271996Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein1e-112405
NC_013971:3713000:372659137265913727586996Erwinia amylovora ATCC 49946 chromosome, complete genomemembrane protein3e-111401
NC_013961:3709800:372633337263333727328996Erwinia amylovora, complete genomeInner membrane protein yiaH3e-111401
NC_004337:3590323:370755037075503708545996Shigella flexneri 2a str. 301, complete genomehypothetical protein3e-101368
NC_006905:3780000:379700537970053798000996Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein2e-100365
NC_014837:33014:594465944660441996Pantoea sp. At-9b chromosome, complete genomeacyltransferase 33e-98358
NC_016779:5189139:5189139518913951901701032Bacillus cereus F837/76 chromosome, complete genomehypothetical protein3e-1376.3
NC_014500:2402881:2413290241329024142941005Dickeya dadantii 3937 chromosome, complete genomeIntegral membrane protein7e-1375.1
NC_005957:5203915:5203915520391552049461032Bacillus thuringiensis serovar konkukian str. 97-27, completehypothetical protein1e-1274.3
NC_020418:3102460:3107917310791731089301014Morganella morganii subsp. morganii KT, complete genomehypothetical protein1e-1274.3
NC_012912:2426520:2439867243986724408711005Dickeya zeae Ech1591, complete genomeacyltransferase 34e-1272.4
NC_013592:2338403:2348467234846723494711005Dickeya dadantii Ech586, complete genomeacyltransferase 32e-1170.1
NC_013716:1138441:114852011485201149518999Citrobacter rodentium ICC168, complete genomeputative prophage membrane protein4e-1169.3
NC_005863:80843:8715787157882811125Desulfovibrio vulgaris subsp. vulgaris str. Hildenboroughhypothetical protein7e-0651.6