Pre_GI: BLASTP Hits

Some Help

Query: NC_015224:4028150:4045046 Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,

Start: 4045046, End: 4045405, Length: 360

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010159:1208699:122927612292761229635360Yersinia pestis Angola, complete genomehypothetical protein2e-29127
NC_017265:4171500:418933141893314189690360Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein8e-30128
NC_005810:4381182:440012344001234400491369Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein9e-30128
NC_017160:3986844:400544340054434005811369Yersinia pestis D182038 chromosome, complete genomehypothetical protein9e-30128
NC_004088:179775:198375198375198743369Yersinia pestis KIM, complete genomehypothetical protein1e-28125
NC_008149:3966586:398518639851863985554369Yersinia pestis Nepal516, complete genomehypothetical protein9e-30128
NC_006155:4210606:422950342295034229871369Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-28124
NC_010634:4150763:416965141696514170010360Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein1e-28124