Pre_GI: BLASTP Hits

Some Help

Query: NC_015224:1641819:1642854 Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,

Start: 1642854, End: 1643564, Length: 711

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014228:1336466:133646613364661337143678Xenorhabdus nematophila ATCC 19061, complete genomeputative transcriptional repressor with homeodomain-like DNA binding domain (TetR/AcrR family)3e-60231
NC_016629:415711:433527433527434234708Desulfovibrio africanus str. Walvis Bay chromosome, completeTranscriptional regulator TetR2e-1685.9
NC_011662:2320100:233901823390182339719702Thauera sp. MZ1T, complete genometranscriptional regulator, TetR family2e-1066.2
NC_002939:173833:191349191349191960612Geobacter sulfurreducens PCA, complete genometranscriptional regulator, TetR family2e-0859.3
NC_012881:964823:968657968657969289633Desulfovibrio salexigens DSM 2638, complete genometranscriptional regulator, TetR family7e-0857.4
NC_021177:3997727:400179040017904002380591Streptomyces fulvissimus DSM 40593, complete genomeTranscriptional regulator, TetR family2e-0756.2
NC_014831:866614:875390875390876166777Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, TetR family2e-0755.8
NC_011725:4600000:461495346149534615591639Bacillus cereus B4264 chromosome, complete genomeTetR family transcriptional regulator5e-0754.7
NC_011772:4565418:458020945802094580847639Bacillus cereus G9842, complete genometranscriptional regulator, TetR family6e-0754.7
NC_015172:2986867:302742730274273028068642Syntrophobotulus glycolicus DSM 8271 chromosome, complete genometranscriptional regulator, TetR family1e-0653.9
NC_015594:160848:162812162812163504693Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeregulatory protein TetR1e-0653.5
NC_007509:309348:317129317129317758630Burkholderia sp. 383 chromosome 3, complete sequencetranscriptional regulator, TetR family1e-0653.1
NC_010814:155834:160065160065160667603Geobacter lovleyi SZ, complete genometranscriptional regulator, TetR family2e-0653.1
NC_019673:7598026:760271776027177603478762Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, TetR family2e-0652.8
NC_011000:1262324:129188312918831292545663Burkholderia cenocepacia J2315 chromosome 1, complete sequenceTetR family regulatory protein2e-0652.8
NC_015580:1328361:134322913432291343909681Novosphingobium sp. PP1Y, complete genomeTetR/AcrR family transcriptional regulator3e-0652
NC_012522:98567:113319113319113927609Rhodococcus opacus B4, complete genomeputative TetR family transcriptional regulator4e-0651.6
NC_013929:2583849:258533825853382585931594Streptomyces scabiei 87.22 chromosome, complete genomeTetR family transcriptional regulator5e-0651.2
NC_012522:3224526:322880632288063229414609Rhodococcus opacus B4, complete genomeputative TetR family transcriptional regulator8e-0650.8