Pre_GI: BLASTP Hits

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Query: NC_014824:263491:278808 Ruminococcus albus 7 plasmid pRUMAL01, complete sequence

Start: 278808, End: 279428, Length: 621

Host Lineage: Ruminococcus albus; Ruminococcus; Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Host; Temp: Mesophile; Temp: 40C. Ruminococcus albus 7 is a common rumen bacterium. This organism is able to degrade cellulose and also produces an antimicrobial compound that prevents the growth of Ruminococcus flavefaciens. The bacterium requires phenylacetic and phenylpropionic acids for maximal growth. The organism produces cellulosomes at the cell surface that are multimeric protein complexes that contain scaffolding proteins and degradative enzymes. Understanding the metabolism of plant polysaccharides may enable scientists to improve the productivity of ruminant organisms such as cattle.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011898:2509267:253223225322322532846615Clostridium cellulolyticum H10, complete genometranscriptional regulator, TetR family5e-25114
NC_021171:608315:629304629304629975672Bacillus sp. 1NLA3E, complete genomeTetR family transcriptional regulator2e-21102
NC_011837:56000:650066500665719714Clostridium kluyveri NBRC 12016, complete genomehypothetical protein1e-1686.7
NC_009706:56000:650066500665626621Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein1e-1686.7
NC_014330:337546:339272339272339889618Brachyspira pilosicoli 95/1000 chromosome, complete genomeTetR family transcriptional regulator5e-1580.9
NC_007907:1547539:156633115663311566966636Desulfitobacterium hafniense Y51, complete genomehypothetical protein8e-1477
NC_015589:2941953:295432629543262955000675Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeregulatory protein TetR9e-1373.6
NC_014831:866614:875390875390876166777Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, TetR family3e-1065.5
NC_015388:1612000:162577716257771626442666Desulfobacca acetoxidans DSM 11109 chromosome, complete genometranscriptional regulator, TetR family8e-1063.5
NC_016803:3795916:381691138169113817612702Desulfovibrio desulfuricans ND132 chromosome, complete genomeTetR family transcriptional regulator2e-0962.4
NC_006177:2398482:242190624219062422553648Symbiobacterium thermophilum IAM 14863, complete genomeTetR family transcriptional regulator4e-0858.2
NC_009633:168266:220777220777221364588Alkaliphilus metalliredigens QYMF chromosome, complete genomeTetR family transcriptional regulator3e-0858.2
NC_011296:1542835:154922215492221549848627Thermodesulfovibrio yellowstonii DSM 11347, complete genometranscriptional regulator, TetR family1e-0756.2
NC_010814:155834:160065160065160667603Geobacter lovleyi SZ, complete genometranscriptional regulator, TetR family2e-0755.8
NC_018870:81396:813968139682133738Thermacetogenium phaeum DSM 12270 chromosome, complete genomeTetR-like transcriptional regulator3e-0755.1
NC_021184:2936244:295949929594992960146648Desulfotomaculum gibsoniae DSM 7213, complete genometranscriptional regulator3e-0755.1
NC_012489:3503632:352462035246203525225606Gemmatimonas aurantiaca T-27, complete genomeTetR family transcriptional regulator5e-0754.7
NC_015172:2628128:263108326310832631667585Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeregulatory protein TetR6e-0753.9
NC_013385:1064188:107194410719441072534591Ammonifex degensii KC4, complete genometranscriptional regulator, TetR family8e-0753.9
NC_015690:2039215:206876320687632069362600Paenibacillus mucilaginosus KNP414 chromosome, complete genomeTetR family transcriptional regulator9e-0753.5
NC_012912:2426520:243471224347122435335624Dickeya zeae Ech1591, complete genometranscriptional regulator, TetR family1e-0653.1
NC_014500:2402881:242317224231722423798627Dickeya dadantii 3937 chromosome, complete genomeputative DNA-binding transcriptional regulatory family of the TetR family2e-0652.8
NC_012125:2646792:266813126681312668769639Salmonella enterica subsp. enterica serovar Paratyphi C straintranscriptional regulator2e-0652.4
NC_010102:1979742:200090520009052001543639Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0652.4
NC_007384:1086025:111171911117191112357639Shigella sonnei Ss046, complete genomeputative tet operon regulator2e-0652.4
NC_016935:2567039:261829326182932618892600Paenibacillus mucilaginosus 3016 chromosome, complete genomeTetR family transcriptional regulator2e-0652.4
NC_011147:1763681:178636117863611786999639Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional regulator2e-0652
NC_006511:1770000:179117817911781791816639Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative transcriptional regulator2e-0652
NC_014614:6115:304193041931048630Clostridium sticklandii, complete genomeputative Regulatory protein, TetR4e-0651.6
NC_013209:2759160:277140327714032772044642Acetobacter pasteurianus IFO 3283-01, complete genometranscriptional regulator TetR4e-0651.6
NC_018515:4474000:447872144787214479305585Desulfosporosinus meridiei DSM 13257 chromosome, complete genometranscriptional regulator3e-0651.6
NC_011740:1189455:119515711951571195795639Escherichia fergusonii ATCC 35469, complete genomeDNA-binding transcriptional regulator of the alternative pyrimidine degradation pathway3e-0651.6
NC_016816:2953530:298857429885742989209636Pantoea ananatis LMG 5342, complete genomeHTH-type transcriptional regulator RutR5e-0651.2
NC_009633:337706:353145353145353717573Alkaliphilus metalliredigens QYMF chromosome, complete genomeTetR family transcriptional regulator5e-0651.2
NC_006322:1959918:196837919683791968957579Bacillus licheniformis ATCC 14580, complete genomehypothetical protein6e-0650.8
NC_009253:3317533:332094233209423321559618Desulfotomaculum reducens MI-1 chromosome, complete genomeTetR family transcriptional regulator6e-0650.8
NC_007907:5428247:545899154589915459644654Desulfitobacterium hafniense Y51, complete genomehypothetical protein5e-0650.8
NC_014915:3320768:336686733668673367790924Geobacillus sp. Y412MC52 chromosome, complete genomeregulatory protein TetR9e-0650.4
NC_009436:1679265:169231516923151692953639Enterobacter sp. 638, complete genomeTetR family transcriptional regulator9e-0650.1
NC_014831:2201246:221887322188732219736864Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, TetR family9e-0650.1
UCMB5137:1594000:160367516036751604283609Bacillus atrophaeus UCMB-5137transcriptional regulator, TetR family protein1e-0550.1