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Query: NC_014334:1954333 Lactobacillus casei str. Zhang chromosome, complete genome

Start: 1954333, End: 1984200, Length: 29868

Host Lineage: Lactobacillus casei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Lactobacillus casei str. Zhang was isolated from traditional home-made koumiss (fermented mare's milk) in Inner Mongolia, China. This strain has the potential probiotic properties such as high resistance to acidic pH and bile salt. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus casei is used as a starter culture during milk fermentation and for the flavor development of certain bacterial-ripened cheeses.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010999:21557142155714218202826315Lactobacillus casei, complete genome015880BLASTN svgBLASTP svg
NC_010999:880878*88087890041319536Lactobacillus casei, complete genome04448BLASTN svgBLASTP svg
NC_008526:817628*81762883659918972Lactobacillus casei ATCC 334, complete genome04446BLASTN svgBLASTP svg
NC_010999:62348962348964609722609Lactobacillus casei, complete genome04389BLASTN svgBLASTP svg
NC_008526:34344534344536727223828Lactobacillus casei ATCC 334, complete genome02631BLASTN svgBLASTP svg
NC_013199:2058857*2058857209031631460Lactobacillus rhamnosus Lc 705, complete genome02248BLASTN svgBLASTP svg
NC_010999:20597382059738208224722510Lactobacillus casei, complete genome02222BLASTN svgBLASTP svg
NC_013198:2088780*2088780211935230573Lactobacillus rhamnosus GG, complete genome02208BLASTN svgBLASTP svg
NC_008526:50626350626352818721925Lactobacillus casei ATCC 334, complete genome01990BLASTN svgBLASTP svg
NC_008526:19735001973500199344619947Lactobacillus casei ATCC 334, complete genome01988BLASTN svgBLASTP svg
NC_008526:56590256590259093225031Lactobacillus casei ATCC 334, complete genome01988BLASTN svgBLASTP svg
NC_014334:36997436997439377323800Lactobacillus casei str. Zhang chromosome, complete genome01988BLASTN svgBLASTP svg
NC_014334:49330849330851458821281Lactobacillus casei str. Zhang chromosome, complete genome01988BLASTN svgBLASTP svg
NC_014334:58952658952661259823073Lactobacillus casei str. Zhang chromosome, complete genome01988BLASTN svgBLASTP svg
NC_008526:23731902373190239665623467Lactobacillus casei ATCC 334, complete genome01980BLASTN svgBLASTP svg
NC_013198:394000*39400046795873959Lactobacillus rhamnosus GG, complete genome01943BLASTN svgBLASTP svg
NC_010610:17650001765000179344828449Lactobacillus fermentum IFO 3956, complete genome01933BLASTN svgBLASTP svg
NC_010999:34925234925236774518494Lactobacillus casei, complete genome3e-74287BLASTN svgBLASTP svg
NC_010999:1381497*1381497140718925693Lactobacillus casei, complete genome1e-39172BLASTN svgBLASTP svg
NC_014219:25845*258454812422280Bacillus selenitireducens MLS10 chromosome, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_013798:345339*34533937221626878Streptococcus gallolyticus UCN34, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_009801:13926961392696142187429179Escherichia coli E24377A, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_007384:20074672007467203964532179Shigella sonnei Ss046, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_014761:74311374311376488521773Oceanithermus profundus DSM 14977 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014829:133305*13330517500741703Bacillus cellulosilyticus DSM 2522 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_007606:12091321209132122967220541Shigella dysenteriae Sd197, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_008702:2259430*2259430228338423955Azoarcus sp. BH72, complete genome4e-0661.9BLASTN svgBLASTP svg