Pre_GI: BLASTP Hits

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Query: NC_014033:395000:400710 Prevotella ruminicola 23 chromosome, complete genome

Start: 400710, End: 401432, Length: 723

Host Lineage: Prevotella ruminicola; Prevotella; Prevotellaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: These organisms are common rumen inhabitants. It is one of the most commonly isolated species from rumen contents and possesses the capacity to degrade plant cell wall polysaccharides, proteins, and peptides, contributing to the utilization of noncellulosic polysaccharides, such as starch and xylan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013894:1380564:140102114010211401953933Thermocrinis albus DSM 14484 chromosome, complete genomeputative RNA polymerase, sigma 70 family subunit1e-1996.7
NC_008710:819389:820347820347821150804Borrelia turicatae 91E135, complete genomeRNA polymerase sigma factor RpoS3e-1892
NC_014330:697429:713067713067713921855Brachyspira pilosicoli 95/1000 chromosome, complete genomeDNA directed RNA polymerase sigma subunit1e-1686.7
NC_019908:2496149:250468525046852505539855Brachyspira pilosicoli P43/6/78 chromosome, complete genomeDNA directed RNA polymerase sigma subunit1e-1686.7
NC_007498:1666242:1677244167724416782871044Pelobacter carbinolicus DSM 2380, complete genomeDNA-directed RNA polymerase, sigma 70/sigma 32 subunit6e-1477.8
NC_009483:3024115:3042895304289530439051011Geobacter uraniireducens Rf4 chromosome, complete genomeRpoD family RNA polymerase sigma factor2e-1376.3
NC_011146:3089297:3106852310685231078531002Geobacter bemidjiensis Bem, complete genomeRNA polymerase, sigma 70 subunit, RpoD family3e-1375.5
NC_012918:1814000:1815755181575518167561002Geobacter sp. M21 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit3e-1375.5
NC_015167:724934:728042728042728905864Cellulophaga lytica DSM 7489 chromosome, complete genomeRpoD subfamily RNA polymerase sigma 70 subunit4e-1375.1
NC_007517:1561466:158865115886511589631981Geobacter metallireducens GS-15, complete genomesigma 28 (Flagella/Sporulation)5e-1374.7
NC_003228:3212500:321592932159293216789861Bacteroides fragilis NCTC 9343, complete genomeputative sigma factor A5e-1374.7
NC_014962:4479989:449534144953414496174834Isosphaera pallida ATCC 43644 chromosome, complete genomeRNA polymerase sigma-38 subunit RpoS6e-1374.7
NC_016510:871000:877846877846878709864Flavobacterium columnare ATCC 49512 chromosome, complete genomeRpoD family RNA polymerase sigma factor6e-1374.3
NC_015638:591964:593277593277594140864Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit6e-1374.3
NC_009614:3476000:349491834949183495778861Bacteroides vulgatus ATCC 8482 chromosome, complete genomeRNA polymerase sigma factor rpoD6e-1374.3
NC_008702:1153344:117263311726331173568936Azoarcus sp. BH72, complete genomeputative RNA polymerase sigma factor9e-1373.9
NC_015164:325212:344338344338345198861Bacteroides salanitronis DSM 18170 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-1273.6
NC_015496:2155816:215908021590802159943864Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily3e-1272.4
NC_014623:4535544:457504845750484575938891Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeRNA polymerase sigma-b factor1e-1170.5
NC_010424:531727:5317275317275328091083Candidatus Desulforudis audaxviator MP104C, complete genomeRNA polymerase, sigma 70 subunit, RpoD family2e-1169.7
NC_012751:1538500:1553846155384615548531008Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeRNA polymerase, sigma S (sigma 38) factor2e-1169.7
NC_011661:1332309:1332309133230913335501242Dictyoglomus turgidum DSM 6724, complete genomeputative RNA polymerase, sigma 70 family subunit4e-1168.6
NC_010694:2971170:299977329997733000765993Erwinia tasmaniensis, complete genomeRNA polymerase sigma factor RpoS4e-1168.6
NC_016818:749673:750744750744751730987Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeRNA polymerase sigma factor RpoS4e-1168.6
NC_013961:851044:852228852228853220993Erwinia amylovora, complete genomeRNA polymerase sigma factor rpoS4e-1168.2
NC_014562:2563466:260248826024882603480993Pantoea vagans C9-1 chromosome, complete genomeRNA polymerase sigma factor rpoD6e-1167.8
NC_014220:1670000:1685266168526616863511086Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-1067
NC_019970:1991944:1999871199987120009441074Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRNA polymerase, sigma 70 subunit, RpoD1e-1066.6
NC_011891:2607812:261038326103832611108726Anaeromyxobacter dehalogenans 2CP-1, complete genomeRNA polymerase, sigma 32 subunit, RpoH1e-1066.6
NC_011145:2543321:254626525462652546990726Anaeromyxobacter sp. K, complete genomeRNA polymerase, sigma 32 subunit, RpoH1e-1066.6
NC_007760:1806136:182872918287291829454726Anaeromyxobacter dehalogenans 2CP-C, complete genomesigma 32 (RpoH)1e-1066.6
NC_015555:863173:8722008722008732731074Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-1066.6
NC_009675:2515669:251566925156692516394726Anaeromyxobacter sp. Fw109-5 chromosome, complete genomeRNA polymerase sigma-32 subunit RpoH1e-1066.6
NC_012034:802453:8024538024538037061254Anaerocellum thermophilum DSM 6725, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-1066.6
NC_013515:550464:5673445673445684831140Streptobacillus moniliformis DSM 12112, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-1066.6
NC_008529:1042220:1071584107158410727021119Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeDNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)2e-1066.2
NC_008054:1030994:1053267105326710543851119Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeRNA polymerase sigma factor RpoD (Sigma-A)2e-1066.2
NC_007644:626992:6482906482906493751086Moorella thermoacetica ATCC 39073, complete genomesigma 38 (RpoS)2e-1065.9
NC_009831:1539159:154015015401501541121972Shewanella sediminis HAW-EB3, complete genomeRNA polymerase, sigma 70 subunit, RpoD family3e-1065.5
NC_012779:3570720:358928535892853590139855Edwardsiella ictaluri 93-146, complete genomealternative sigma factor RpoH, putative4e-1065.5
NC_014033:395000:418221418221418937717Prevotella ruminicola 23 chromosome, complete genomeputative sigma factor5e-1064.7
NC_013517:3082279:3083339308333930845021164Sebaldella termitidis ATCC 33386, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily7e-1064.3
NC_009929:58465:800918009180900810Acaryochloris marina MBIC11017 plasmid pREB4, complete sequenceRNA polymerase sigma-70 factor, putative8e-1063.9
NC_004578:1719849:1727080172708017280871008Pseudomonas syringae pv. tomato str. DC3000, complete genomeRNA polymerase sigma factor9e-1063.9
NC_014393:1782811:1798057179805717991481092Clostridium cellulovorans 743B chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-0963.5
NC_013192:1993718:1993718199371819948961179Leptotrichia buccalis DSM 1135, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-0963.5
NC_006831:664000:666015666015666974960Ehrlichia ruminantium str. Gardel, complete genomeRNA polymerase sigma-32 factor2e-0963.2
NC_006832:668913:670354670354671316963Ehrlichia ruminantium str. Welgevonden, complete genomeRNA polymerase sigma-32 factor2e-0963.2
NC_007298:2689731:271902027190202719949930Dechloromonas aromatica RCB, complete genomeRNA polymerase sigma factor2e-0962.8
NC_009930:4909:293182931830124807Acaryochloris marina MBIC11017 plasmid pREB5, complete sequenceRNA polymerase sigma-70 factor2e-0962.8
NC_005295:689500:690509690509691399891Ehrlichia ruminantium str. Welgevonden, complete genomeRNA polymerase sigma-32 factor2e-0962.8
NC_010995:2547164:2553509255350925545161008Cellvibrio japonicus Ueda107, complete genomeRNA polymerase sigma factor RpoS3e-0962.4
NC_012918:2758775:279005027900502791027978Geobacter sp. M21 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit3e-0962.4
NC_021182:2219286:2228867222886722299881122Clostridium pasteurianum BC1, complete genomeRNA polymerase sigma factor, sigma-70 family3e-0962
NC_015663:770485:7723817723817742251845Enterobacter aerogenes KCTC 2190 chromosome, complete genomeRNA polymerase sigma factor RpoD4e-0962
NC_010723:915697:9156979156979168211125Clostridium botulinum E3 str. Alaska E43, complete genomeRNA polymerase sigma factor RpoD5e-0961.6
NC_008262:2169262:2181235218123521823351101Clostridium perfringens SM101, complete genomeRNA polymerase sigma factor RpoD6e-0961.2
NC_003366:2286083:2298082229808222992031122Clostridium perfringens str. 13, complete genomeRNA polymerase sigma factor6e-0961.2
NC_014618:690056:7265327265327283761845Enterobacter cloacae SCF1 chromosome, complete genomeRNA polymerase sigma-70 subunit RpoD1e-0860.1
NC_008529:1042220:1070412107041210715481137Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeDNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)1e-0860.1
NC_008054:1030994:1052095105209510532311137Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeRNA polymerase sigma factor1e-0860.1
NC_011365:502620:519355519355520242888Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeRNA polymerase factor sigma-321e-0860.1
NC_010125:2295500:231102723110272312004978Gluconacetobacter diazotrophicus PAl 5, complete genomeputative RNA polymerase sigma-32 factor2e-0859.7
NC_017160:676249:6950996950996961571059Yersinia pestis D182038 chromosome, complete genomeRNA polymerase sigma factor RpoD2e-0859.7
NC_006270:2591317:2606437260643726075581122Bacillus licheniformis ATCC 14580, complete genomeRNA polymerase sigma factor2e-0859.3
NC_013416:1429881:1448118144811814499681851Aggregatibacter actinomycetemcomitans D11S-1, complete genomeRNA polymerase sigma factor RpoD (Sigma-70)2e-0859.3
NC_006322:2592176:2607296260729626084171122Bacillus licheniformis ATCC 14580, complete genomeRNA polymerase sigma factor2e-0859.3
NC_008149:587689:6087836087836106211839Yersinia pestis Nepal516, complete genomeRNA polymerase sigma factor RpoD2e-0859.3
NC_009708:633054:6495746495746514121839Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeRNA polymerase sigma factor RpoD2e-0859.3
NC_014029:729675:7507627507627526001839Yersinia pestis Z176003 chromosome, complete genomeRNA polymerase sigma factor RpoD2e-0859.3
NC_017154:671816:6929146929146947521839Yersinia pestis D106004 chromosome, complete genomeRNA polymerase sigma factor RpoD2e-0859.3
NC_015224:3892972:3894878389487838967161839Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,RNA polymerase sigma factor RpoD2e-0859.3
NC_008513:13484:161811618117056876Buchnera aphidicola str. Cc (Cinara cedri), complete genomeRNA polymerase sigma-32 factor2e-0859.3
NC_008800:4013298:4019198401919840210361839Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,RNA polymerase sigma factor RpoD2e-0859.3
NC_019978:2036779:205421120542112054906696Halobacteroides halobius DSM 5150, complete genomeRNA polymerase sigma-K factor2e-0859.3
NC_005125:182701:1947391947391958091071Gloeobacter violaceus PCC 7421, complete genomegroup 2 sigma 70-type sigma factor3e-0858.9
NC_015581:1791658:179242117924211793278858Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeRNA polymerase, sigma 32 subunit, RpoH3e-0858.9
NC_016513:1761830:1782400178240017842501851Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeDNA-directed RNA polymerase sigma subunit RpoD3e-0858.9
NC_016816:674171:6861796861796880231845Pantoea ananatis LMG 5342, complete genomeRNA polymerase sigma factor RpoD3e-0858.5
NC_007798:260324:279854279854280720867Neorickettsia sennetsu str. Miyayama, complete genomeRNA polymerase sigma-32 factor6e-0858.2
NC_014657:914071:916231916231917052822Caldicellulosiruptor owensensis OL chromosome, complete genomeRNA polymerase, sigma 70 subunit, rpod subfamily5e-0858.2
NC_014313:2059933:206294420629442063834891Hyphomicrobium denitrificans ATCC 51888 chromosome, completeRNA polymerase, sigma 32 subunit, RpoH5e-0858.2
NC_014837:3739408:3746389374638937482331845Pantoea sp. At-9b chromosome, complete genomeRNA polymerase,sigma 70 subunit,RpoD6e-0857.8
NC_013009:270000:291112291112291978867Neorickettsia risticii str. Illinois, complete genomeRNA polymerase sigma-32 factor (RpoH)8e-0857.4
NC_011969:3627980:365406836540683654787720Bacillus cereus Q1 chromosome, complete genomesporulation sigma factor sige1e-0757
NC_007644:1603696:161628816162881616968681Moorella thermoacetica ATCC 39073, complete genomesigma 28 (Flagella/Sporulation)1e-0756.6
NC_007946:3855445:386624838662483867102855Escherichia coli UTI89, complete genomecomponent of RNA polymerase, sigma 32 factor1e-0756.6
NC_008563:3888232:389904338990433899897855Escherichia coli APEC O1, complete genomeRNA polymerase sigma factor1e-0756.6
NC_011742:3799788:381378338137833814637855Escherichia coli S88 chromosome, complete genomeRNA polymerase factor sigma-321e-0756.6
NC_009727:357206:3772503772503793462097Coxiella burnetii Dugway 7E9-12, complete genomeRNA polymerase sigma factor RpoD2e-0756.2
NC_010742:1595065:161634716163471617258912Brucella abortus S19 chromosome 1, complete sequenceSigma-70 factor family2e-0756.2
NC_006932:1596732:161801416180141618925912Brucella abortus biovar 1 str. 9-941 chromosome I, completeRNA polymerase sigma factor2e-0756.2
NC_007618:1593886:161517016151701616081912Brucella melitensis biovar Abortus 2308 chromosome I, completeSigma-70 factor family:Sigma-70 region 2:Sigma-70 region 42e-0756.2
NC_002971:1523065:1541273154127315433692097Coxiella burnetii RSA 493, complete genomeRNA polymerase sigma factor RpoD2e-0756.2
NC_010103:1577750:159903115990311599942912Brucella canis ATCC 23365 chromosome I, complete sequencealternative sigma factor RpoH2e-0756.2
NC_009952:2752500:277254127725412773437897Dinoroseobacter shibae DFL 12, complete genomeRNA polymerase2e-0756.2
NC_015857:1609670:163095016309501631861912Brucella pinnipedialis B2/94 chromosome chromosome 1, completeRNA polymerase factor sigma-322e-0756.2
NC_004310:1578918:160019816001981601109912Brucella suis 1330 chromosome I, complete sequenceRNA polymerase sigma factor2e-0756.2
NC_009053:1668500:1688201168820116900601860Actinobacillus pleuropneumoniae L20, complete genomeRNA polymerase sigma factor 703e-0755.8
NC_010278:1625695:1649248164924816511071860Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,RNA polymerase sigma factor RpoD3e-0755.8
NC_010505:5967324:597047859704785971371894Methylobacterium radiotolerans JCM 2831, complete genomeRNA polymerase, sigma 32 subunit, RpoH3e-0755.8
NC_008601:1151653:115361411536141154492879Francisella tularensis subsp. novicida U112, complete genomeRNA polymerase sigma-32 factor3e-0755.8
NC_010002:1879220:188397618839761884920945Delftia acidovorans SPH-1, complete genomeRNA polymerase, sigma 32 subunit, RpoH3e-0755.5
NC_016602:3122700:3127558312755831294441887Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceRNA polymerase sigma factor RpoD3e-0755.5
NC_015662:15641:174671746718342876Buchnera aphidicola (Cinara tujafilina) chromosome, completeRNA polymerase sigma-32 factor4e-0755.5
NC_010939:1633000:1651959165195916538181860Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeRNA polymerase sigma factor 704e-0755.5
NC_016799:1439000:147027314702731471262990Corynebacterium diphtheriae 31A chromosome, complete genomeRNA polymerase sigma factor B5e-0755.1
NC_009465:90000:1217341217341235451812Candidatus Vesicomyosocius okutanii HA, complete genomeDNA-directed RNA polymerase sigma-70 factor5e-0755.1
NC_002505:514732:5504075504075522841878Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeRNA polymerase sigma factor4e-0755.1
NC_016445:2938887:2961443296144329633201878Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeRNA polymerase primary sigma factor4e-0755.1
NC_009445:1453132:145613414561341457033900Bradyrhizobium sp. ORS 278 chromosome, complete genomeRNA polymerase factor sigma-324e-0755.1
NC_012668:62500:6800568005699331929Vibrio cholerae MJ-1236 chromosome 1, complete sequenceRNA polymerase sigma factor RpoD4e-0755.1
NC_016787:1350676:141004114100411411030990Corynebacterium diphtheriae HC03 chromosome, complete genomeRNA polymerase sigma factor B6e-0754.7
NC_016786:1359064:141872814187281419717990Corynebacterium diphtheriae HC01 chromosome, complete genomeRNA polymerase sigma factor B6e-0754.7
NC_016785:1357500:139661513966151397604990Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeRNA polymerase sigma factor B6e-0754.7
NC_016782:1385800:141846314184631419452990Corynebacterium diphtheriae 241 chromosome, complete genomeRNA polymerase sigma factor B6e-0754.7
NC_002935:1378566:143012114301211431110990Corynebacterium diphtheriae NCTC 13129, complete genomeRNA polymerase sigma factor6e-0754.7
NC_007912:909112:9259819259819278221842Saccharophagus degradans 2-40, complete genomeputative transcriptional regulator, Fis family6e-0754.7
NC_009485:7021228:704376170437617044660900Bradyrhizobium sp. BTAi1 chromosome, complete genomeRNA polymerase factor sigma-326e-0754.7
NC_016788:1376000:141350614135061414495990Corynebacterium diphtheriae HC04 chromosome, complete genomeRNA polymerase sigma factor B6e-0754.7
NC_016790:1345638:138610813861081387097990Corynebacterium diphtheriae VA01 chromosome, complete genomeRNA polymerase sigma factor B6e-0754.7
NC_016800:1411000:144660414466041447593990Corynebacterium diphtheriae BH8 chromosome, complete genomeRNA polymerase sigma factor B6e-0754.7
NC_011296:909558:9211909211909226291440Thermodesulfovibrio yellowstonii DSM 11347, complete genomeRNA polymerase sigma factor RpoD5e-0754.7
NC_009656:475465:480115480115480969855Pseudomonas aeruginosa PA7 chromosome, complete genomeRNA polymerase factor sigma-325e-0754.7
NC_016789:1432000:146396714639671464956990Corynebacterium diphtheriae PW8 chromosome, complete genomeRNA polymerase sigma factor B6e-0754.7
NC_016783:1397975:143905514390551440044990Corynebacterium diphtheriae INCA 402 chromosome, complete genomeRNA polymerase sigma factor B6e-0754.7
NC_017262:623351:625601625601626509909Zymomonas mobilis subsp. mobilis ATCC 10988 chromosome, completeRNA polymerase sigma-32 subunit RpoH6e-0754.7
NC_016802:1317365:140325414032541404243990Corynebacterium diphtheriae HC02 chromosome, complete genomeRNA polymerase sigma factor B6e-0754.7
NC_016801:1422500:146025714602571461246990Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeRNA polymerase sigma factor B6e-0754.7
NC_014366:2393702:239507623950762395933858Gamma proteobacterium HdN1, complete genomeRNA polymerase sigma factor7e-0754.3
NC_015733:443122:4575524575524594021851Pseudomonas putida S16 chromosome, complete genomeRNA polymerase sigma factor RpoD1e-0653.9
NC_007354:569321:571776571776572678903Ehrlichia canis str. Jake, complete genomeSigma-70 region 2:Sigma-70 region 41e-0653.9
NC_015672:2236000:225557622555762256508933Flexistipes sinusarabici DSM 4947 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit1e-0653.9
NC_009512:469000:4860034860034878531851Pseudomonas putida F1, complete genomeRNA polymerase, sigma 70 subunit, RpoD9e-0753.9
NC_010172:1079127:107912710791271080020894Methylobacterium extorquens PA1, complete genomeRNA polymerase sigma factor RpoH9e-0753.9
NC_007799:647514:670231670231671124894Ehrlichia chaffeensis str. Arkansas, complete genomeRNA polymerase sigma-32 factor1e-0653.1
NC_013960:2261487:227817022781702279033864Nitrosococcus halophilus Nc4 chromosome, complete genomeRNA polymerase sigma factor RpoH2e-0652.8
NC_004545:15650:5831358313601421830Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeRNA polymerase sigma factor RpoD2e-0652.8
NC_018677:111500:115439115439116281843Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeRNA polymerase sigma factor RpoH4e-0652
NC_018507:115346:121872121872122714843Candidatus Portiera aleyrodidarum BT-B chromosome, complete genomeRNA polymerase sigma-32 subunit RpoH4e-0652
NC_007645:6407370:6411603641160364135221920Hahella chejuensis KCTC 2396, complete genomeRNA polymerase sigma-70 factor RpoD3e-0652
NC_011662:1160887:116325211632521164103852Thauera sp. MZ1T, complete genomeRNA polymerase, sigma 32 subunit, RpoH3e-0652
NC_008463:632869:6471916471916490441854Pseudomonas aeruginosa UCBPP-PA14, complete genomesigma factor RpoD7e-0651.2
NC_010003:795355:8370528370528382961245Petrotoga mobilis SJ95, complete genomeRNA polymerase, sigma 70 subunit, RpoD family7e-0650.8