Pre_GI: BLASTN Hits

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Query: NC_013929:7117326 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 7117326, End: 7140545, Length: 23220

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015953:20590832059083208140822326Streptomyces sp. SirexAA-E chromosome, complete genome03007BLASTN svgBLASTP svg
NC_021177:21858982185898220648120584Streptomyces fulvissimus DSM 40593, complete genome02839BLASTN svgBLASTP svg
NC_015957:85697218569721859285323133Streptomyces violaceusniger Tu 4113 chromosome, complete genome02724BLASTN svgBLASTP svg
NC_013757:3651646*3651646369128339638Geodermatophilus obscurus DSM 43160, complete genome2e-109404BLASTN svgBLASTP svg
NC_009921:85497578549757862261572859Frankia sp. EAN1pec, complete genome2e-99371BLASTN svgBLASTP svg
NC_013947:50755815075581509797822398Stackebrandtia nassauensis DSM 44728 chromosome, complete genome3e-74287BLASTN svgBLASTP svg
NC_008726:39682223968222399875830537Mycobacterium vanbaalenii PYR-1, complete genome4e-73283BLASTN svgBLASTP svg
NC_018681:24478712447871247939431524Nocardia brasiliensis ATCC 700358 chromosome, complete genome4e-67264BLASTN svgBLASTP svg
NC_015312:2278566*2278566232680848243Pseudonocardia dioxanivorans CB1190 chromosome, complete genome6e-63250BLASTN svgBLASTP svg
NC_014318:2252417*2252417228159929183Amycolatopsis mediterranei U32 chromosome, complete genome9e-62246BLASTN svgBLASTP svg
NC_013235:2257899*2257899229859940701Nakamurella multipartita DSM 44233, complete genome5e-51210BLASTN svgBLASTP svg
NC_020302:21905002190500220939218893Corynebacterium halotolerans YIM 70093 = DSM 44683, complete3e-37165BLASTN svgBLASTP svg
NC_010943:49300249300251859925598Stenotrophomonas maltophilia K279a, complete genome2e-34155BLASTN svgBLASTP svg
NC_016010:63753563753566446226928Xanthomonas axonopodis pv. citrumelo F1 chromosome, complete1e-33153BLASTN svgBLASTP svg
NC_014924:29619702961970298516923200Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome4e-33151BLASTN svgBLASTP svg
NC_011071:42920442920445640627203Stenotrophomonas maltophilia R551-3, complete genome6e-32147BLASTN svgBLASTP svg
NC_015947:44446644446646432519860Burkholderia sp. JV3 chromosome, complete genome6e-32147BLASTN svgBLASTP svg
NC_007508:68904668904671040421359Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome2e-28135BLASTN svgBLASTP svg
NC_013757:3100515*3100515312110420590Geodermatophilus obscurus DSM 43160, complete genome1e-26129BLASTN svgBLASTP svg
NC_007164:77500077500079726122262Corynebacterium jeikeium K411, complete genome6e-26127BLASTN svgBLASTP svg
NC_015953:26405002640500266269222193Streptomyces sp. SirexAA-E chromosome, complete genome2e-25125BLASTN svgBLASTP svg
NC_010688:673454*67345470601432561Xanthomonas campestris pv. campestris, complete genome3e-24121BLASTN svgBLASTP svg
NC_008268:17486351748635177239623762Rhodococcus sp. RHA1, complete genome1e-20109BLASTN svgBLASTP svg
NC_003888:3138905*3138905316269723793Streptomyces coelicolor A3(2), complete genome1e-1799.6BLASTN svgBLASTP svg
NC_010572:54450815445081548674141661Streptomyces griseus subsp. griseus NBRC 13350, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_018868:12717421271742129953427793Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_001263:243000*24300026750924510Deinococcus radiodurans R1 chromosome 1, complete sequence5e-1487.7BLASTN svgBLASTP svg
NC_007953:10889331088933110876919837Burkholderia xenovorans LB400 chromosome 3, complete sequence7e-1383.8BLASTN svgBLASTP svg
NC_018750:3988196*3988196400732519130Streptomyces venezuelae ATCC 10712, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_003888:4251867*4251867430640654540Streptomyces coelicolor A3(2), complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011002:77224377224379174119499Burkholderia cenocepacia J2315 chromosome 3, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_014666:87598738759873878287423002Frankia sp. EuI1c chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_003888:43143894314389433545821070Streptomyces coelicolor A3(2), complete genome3e-0661.9BLASTN svgBLASTP svg