Pre_GI: BLASTN Hits

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Query: NC_013929:66500 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 66500, End: 84517, Length: 18018

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014210:26387732638773266766328891Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,3e-42180BLASTN svgBLASTP svg
NC_003155:45920004592000463614444145Streptomyces avermitilis MA-4680, complete genome2e-1591.7BLASTN svgBLASTP svg
NC_003888:76596397659639770388744249Streptomyces coelicolor A3(2), complete genome9e-1589.7BLASTN svgBLASTP svg
NC_003888:56225562259004333819Streptomyces coelicolor A3(2), complete genome9e-1589.7BLASTN svgBLASTP svg
NC_003888:38931873893187391788524699Streptomyces coelicolor A3(2), complete genome9e-1589.7BLASTN svgBLASTP svg
NC_003888:38170003817000385464537646Streptomyces coelicolor A3(2), complete genome9e-1589.7BLASTN svgBLASTP svg
NC_015957:32821833282183330581123629Streptomyces violaceusniger Tu 4113 chromosome, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_018524:4988810*4988810503746448655Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_015312:52406535240653526596525313Pseudonocardia dioxanivorans CB1190 chromosome, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_009921:5202607*5202607524409941493Frankia sp. EAN1pec, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_003155:36550036550038509919600Streptomyces avermitilis MA-4680, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_003155:32097932097933918518207Streptomyces avermitilis MA-4680, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_014391:67105006710500673732426825Micromonospora aurantiaca ATCC 27029 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg