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Query: NC_013929:3600343 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 3600343, End: 3648665, Length: 48323

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015953:47469834746983477386726885Streptomyces sp. SirexAA-E chromosome, complete genome5e-28135BLASTN svgBLASTP svg
NC_019673:15847391584739160360318865Saccharothrix espanaensis DSM 44229 complete genome2e-21113BLASTN svgBLASTP svg
NC_007777:28410002841000290393262933Frankia sp. CcI3, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_019673:4974422*4974422499802723606Saccharothrix espanaensis DSM 44229 complete genome4e-1075.8BLASTN svgBLASTP svg
NC_013093:54194585419458545295833501Actinosynnema mirum DSM 43827, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_020453:10729791072979112047147493Agromonas oligotrophica S58 DNA, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_020453:10842381084238114489760660Agromonas oligotrophica S58 DNA, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_013722:1785692*1785692183919253501Xanthomonas albilineans, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_007005:44113884411388444643035043Pseudomonas syringae pv. syringae B728a, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_009926:193821*19382121297719157Acaryochloris marina MBIC11017 plasmid pREB1, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_008095:4189082*4189082423409745016Myxococcus xanthus DK 1622, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008786:27296352729635277134341709Verminephrobacter eiseniae EF01-2, complete genome6e-0661.9BLASTN svgBLASTP svg