Query: NC_013929:3600343 Streptomyces scabiei 87.22 chromosome, complete genome
Start: 3600343, End: 3648665, Length: 48323
Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_015953:4746983 | 4746983 | 4773867 | 26885 | Streptomyces sp. SirexAA-E chromosome, complete genome | 5e-28 | 135 | BLASTN svg | BLASTP svg |
NC_019673:1584739 | 1584739 | 1603603 | 18865 | Saccharothrix espanaensis DSM 44229 complete genome | 2e-21 | 113 | BLASTN svg | BLASTP svg |
NC_007777:2841000 | 2841000 | 2903932 | 62933 | Frankia sp. CcI3, complete genome | 1e-10 | 77.8 | BLASTN svg | BLASTP svg |
NC_019673:4974422* | 4974422 | 4998027 | 23606 | Saccharothrix espanaensis DSM 44229 complete genome | 4e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_013093:5419458 | 5419458 | 5452958 | 33501 | Actinosynnema mirum DSM 43827, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_020453:1072979 | 1072979 | 1120471 | 47493 | Agromonas oligotrophica S58 DNA, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_020453:1084238 | 1084238 | 1144897 | 60660 | Agromonas oligotrophica S58 DNA, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_013722:1785692* | 1785692 | 1839192 | 53501 | Xanthomonas albilineans, complete genome | 9e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_007005:4411388 | 4411388 | 4446430 | 35043 | Pseudomonas syringae pv. syringae B728a, complete genome | 9e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_009926:193821* | 193821 | 212977 | 19157 | Acaryochloris marina MBIC11017 plasmid pREB1, complete sequence | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_008095:4189082* | 4189082 | 4234097 | 45016 | Myxococcus xanthus DK 1622, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_008786:2729635 | 2729635 | 2771343 | 41709 | Verminephrobacter eiseniae EF01-2, complete genome | 6e-06 | 61.9 | BLASTN svg | BLASTP svg |