Query: NC_013929:3206688 Streptomyces scabiei 87.22 chromosome, complete genome
Start: 3206688, End: 3227570, Length: 20883
Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_019950:481881 | 481881 | 506007 | 24127 | Mycobacterium canettii CIPT 140060008 complete genome | 5e-29 | 137 | BLASTN svg | BLASTP svg |
NC_000962:475816 | 475816 | 499619 | 23804 | Mycobacterium tuberculosis H37Rv, complete genome | 5e-29 | 137 | BLASTN svg | BLASTP svg |
NC_002755:472872 | 472872 | 496457 | 23586 | Mycobacterium tuberculosis CDC1551, complete genome | 5e-29 | 137 | BLASTN svg | BLASTP svg |
NC_002945:476835 | 476835 | 500638 | 23804 | Mycobacterium bovis AF2122/97, complete genome | 5e-29 | 137 | BLASTN svg | BLASTP svg |
NC_008769:507000 | 507000 | 530434 | 23435 | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome | 5e-29 | 137 | BLASTN svg | BLASTP svg |
NC_009525:477093 | 477093 | 500929 | 23837 | Mycobacterium tuberculosis H37Ra, complete genome | 5e-29 | 137 | BLASTN svg | BLASTP svg |
NC_009565:479500 | 479500 | 502789 | 23290 | Mycobacterium tuberculosis F11, complete genome | 5e-29 | 137 | BLASTN svg | BLASTP svg |
NC_012207:477500 | 477500 | 500767 | 23268 | Mycobacterium bovis BCG str. Tokyo 172, complete genome | 5e-29 | 137 | BLASTN svg | BLASTP svg |
NC_015848:483500 | 483500 | 509988 | 26489 | Mycobacterium canettii CIPT 140010059, complete genome | 5e-29 | 137 | BLASTN svg | BLASTP svg |
NC_010612:835648 | 835648 | 862999 | 27352 | Mycobacterium marinum M, complete genome | 8e-28 | 133 | BLASTN svg | BLASTP svg |
NC_013715:98000* | 98000 | 120262 | 22263 | Rothia mucilaginosa DY-18, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_012779:2586175 | 2586175 | 2613234 | 27060 | Edwardsiella ictaluri 93-146, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |