Pre_GI: BLASTP Hits

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Query: NC_013929:7663631:7669862 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 7669862, End: 7670857, Length: 996

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018750:6950695:697001969700196970894876Streptomyces venezuelae ATCC 10712, complete genomeputative DNA-binding protein2e-110399
NC_017093:8518961:852462485246248525514891Actinoplanes missouriensis 431, complete genomeputative DNA-binding protein4e-56218
NC_014165:2888961:290308629030862903943858Thermobispora bispora DSM 43833 chromosome, complete genomehelix-turn-helix domain-containing protein2e-55216
NC_014666:8198554:822022582202258221091867Frankia sp. EuI1c chromosome, complete genomehelix-turn-helix domain protein8e-55214
NC_013510:5309143:531986853198685320725858Thermomonospora curvata DSM 43183, complete genomehelix-turn-helix domain protein8e-52204
NC_008278:132000:141420141420142196777Frankia alni ACN14a, complete genomePutative DNA-binding protein2e-51202
NC_014666:1117000:113569311356931136553861Frankia sp. EuI1c chromosome, complete genomehelix-turn-helix domain protein3e-45182
NC_013595:8338619:834680983468098347672864Streptosporangium roseum DSM 43021, complete genomehypothetical protein2e-43176
NC_016582:6999074:701136370113637012175813Streptomyces bingchenggensis BCW-1 chromosome, complete genomeDNA-binding protein2e-43176
NC_014210:618500:636013636013636870858Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,helix-turn-helix domain protein1e-42174
NC_016111:3577572:358466335846633585508846Streptomyces cattleya NRRL 8057, complete genomeregulatory protein7e-40164
NC_007777:461500:470552470552471442891Frankia sp. CcI3, complete genomeputative DNA-binding protein1e-39164
NC_013093:7174636:717771371777137178570858Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, XRE family1e-38160
NC_003155:6295078:630347763034776304325849Streptomyces avermitilis MA-4680, complete genomeDNA-binding protein2e-38159
NC_013929:6343000:635516563551656355971807Streptomyces scabiei 87.22 chromosome, complete genomeregulatory protein1e-37157
NC_003888:3111998:312209131220913122933843Streptomyces coelicolor A3(2), complete genomeregulatory protein1e-37157
NC_015957:336500:343902343902344747846Streptomyces violaceusniger Tu 4113 chromosome, complete genomehelix-turn-helix domain-containing protein5e-37155
NC_013595:8603188:862421786242178625092876Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, XRE family1e-34147
NC_015434:4640769:464580646458064646765960Verrucosispora maris AB-18-032 chromosome, complete genomehelix-turn-helix domain-containing protein2e-34146
NC_007333:2093167:210360821036082104447840Thermobifida fusca YX, complete genomehelix-turn-helix motif5e-32138
NC_009380:581000:589581589581590393813Salinispora tropica CNB-440 chromosome, complete genomehelix-turn-helix domain-containing protein5e-32138
NC_016887:4403872:441600344160034416932930Nocardia cyriacigeorgica GUH-2, complete genomeputative DNA binding protein9e-31134
NC_008278:6885254:690729269072926908092801Frankia alni ACN14a, complete genomeputative DNA-binding protein3e-29129
NC_014210:1588426:160049716004971601357861Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, XRE family5e-29128
NC_018750:6192970:620089562008956201815921Streptomyces venezuelae ATCC 10712, complete genomeregulatory protein9e-29127
NC_007333:1129826:114288611428861143740855Thermobifida fusca YX, complete genomehelix-turn-helix motif3e-28125
NC_016582:3763476:377266637726663773532867Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative DNA-binding protein3e-28125
NC_018524:2246225:227205122720512272884834Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehelix-turn-helix family protein8e-28124
NC_007333:430000:437708437708438553846Thermobifida fusca YX, complete genomehelix-turn-helix motif2e-27123
NC_015434:3755560:376664437666443767525882Verrucosispora maris AB-18-032 chromosome, complete genomehelix-turn-helix domain-containing protein4e-27122
NC_019673:1275627:130579813057981306682885Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein9e-27121
NC_003888:6568000:657921365792136580073861Streptomyces coelicolor A3(2), complete genomeDNA-binding protein2e-26119
NC_016582:4934854:494431449443144945195882Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein4e-26119
NC_015953:3258000:326489932648993265825927Streptomyces sp. SirexAA-E chromosome, complete genomehelix-turn-helix domain-containing protein1e-25117
NC_009380:725870:725870725870726763894Salinispora tropica CNB-440 chromosome, complete genomehelix-turn-helix domain-containing protein1e-25117
NC_009380:1491428:151443915144391515320882Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein2e-25116
NC_016887:511034:520181520181521056876Nocardia cyriacigeorgica GUH-2, complete genomeputative DNA-binding protein3e-25116
NC_014210:4188448:419437041943704195233864Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, XRE family5e-25115
NC_013510:5175649:518784851878485188720873Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family7e-25114
NC_013947:1537275:155630815563081557171864Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehypothetical protein1e-24114
NC_014211:174694:181153181153181977825Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 plasmidtranscriptional regulator, XRE family4e-24112
NC_016887:1949927:196913919691391969894756Nocardia cyriacigeorgica GUH-2, complete genomeXRE family transcriptional regulator3e-24112
NC_013510:4319296:433051643305164331355840Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family2e-23109
NC_018681:2176000:218106721810672181957891Nocardia brasiliensis ATCC 700358 chromosome, complete genomeXRE family transcriptional regulator4e-23108
NC_007333:1559321:156710515671051568004900Thermobifida fusca YX, complete genomeputative DNA-binding protein8e-23107
NC_015953:3313000:332751533275153328384870Streptomyces sp. SirexAA-E chromosome, complete genomeXRE family transcriptional regulator9e-23107
NC_006361:498305:508199508199509092894Nocardia farcinica IFM 10152, complete genomeputative DNA-binding protein1e-22107
NC_010572:82000:922639226393192930Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA-binding protein6e-22105
NC_016887:55000:701527015270958807Nocardia cyriacigeorgica GUH-2, complete genomeputative DNA-binding protein1e-21104
NC_003888:4927170:495958449595844960435852Streptomyces coelicolor A3(2), complete genomehypothetical protein9e-22104
NC_016887:5988878:599475759947575995653897Nocardia cyriacigeorgica GUH-2, complete genomeputative DNA-binding protein8e-22104
NC_009953:1581088:159099015909901591757768Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein2e-21103
NC_013510:517878:549610549610550413804Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family2e-21103
NC_014210:2277971:228780622878062288609804Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, XRE family5e-21102
NC_003155:5005913:500736750073675008239873Streptomyces avermitilis MA-4680, complete genomeDNA-binding protein1e-20100
NC_016113:1143580:115353911535391154375837Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceDNA-binding protein1e-20100
NC_016582:9664000:967380696738069674723918Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein3e-2099.8
NC_013510:5394432:542319154231915424000810Thermomonospora curvata DSM 43183, complete genomehypothetical protein3e-2099.4
NC_016111:4003290:401923940192394020021783Streptomyces cattleya NRRL 8057, complete genomeDNA-binding protein4e-2099
NC_010572:5445081:547374554737455474428684Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein4e-2099
NC_019673:2051363:206851720685172069416900Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-1997.1
NC_006361:1827991:183273018327301833656927Nocardia farcinica IFM 10152, complete genomeputative DNA-binding protein2e-1996.7
NC_017186:7841740:785295378529537853720768Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein3e-1996.3
NC_014318:7821227:785290778529077853674768Amycolatopsis mediterranei U32 chromosome, complete genomehelix-turn-helix domain-containing protein3e-1996.3
NC_013093:4247811:426232542623254263176852Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, XRE family4e-1995.5
NC_014210:5309121:532623653262365327090855Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, XRE family1e-1894
NC_013947:4695000:470870947087094709560852Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehelix-turn-helix domain-containing protein2e-1893.6
NC_016111:2651500:266677826667782667587810Streptomyces cattleya NRRL 8057, complete genomehypothetical protein2e-1893.6
NC_014210:5048502:506004750600475060913867Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, XRE family2e-1893.2
NC_013929:6526745:653513365351336535969837Streptomyces scabiei 87.22 chromosome, complete genomeDNA-binding protein3e-1893.2
NC_009953:1034809:104109910410991041896798Salinispora arenicola CNS-205 chromosome, complete genomehelix-turn-helix domain-containing protein3e-1893.2
NC_013947:5546315:555883255588325559650819Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehypothetical protein3e-1892.8
NC_013595:8553904:856230685623068562959654Streptosporangium roseum DSM 43021, complete genomehypothetical protein3e-1892.8
NC_016109:2065326:207701520770152077842828Kitasatospora setae KM-6054, complete genomehypothetical protein3e-1892.8
NC_013947:656140:666520666520667377858Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehelix-turn-helix domain-containing protein4e-1892.4
NC_016582:9459566:946873494687349469609876Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative chitinase-promoter-binding protein8e-1891.3
NC_013159:2913927:292398329239832924870888Saccharomonospora viridis DSM 43017, complete genomeHelix-turn-helix protein1e-1790.9
NC_016111:5515462:552035955203595521216858Streptomyces cattleya NRRL 8057, complete genomeDNA-binding protein2e-1790.5
NC_021177:2309615:232354323235432324382840Streptomyces fulvissimus DSM 40593, complete genomeTranscriptional regulator, XRE family2e-1790.5
NC_015957:8845274:886036588603658861210846Streptomyces violaceusniger Tu 4113 chromosome, complete genomeputative DNA-binding protein3e-1789.7
NC_013510:1614000:161614016161401616946807Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family3e-1789.4
NC_007333:1129826:114522311452231146071849Thermobifida fusca YX, complete genomehelix-turn-helix motif4e-1789
NC_016582:5769080:577505757750575775887831Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative DNA-binding protein4e-1789
NC_013510:1637730:164894816489481649778831Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family6e-1788.6
NC_009142:949510:967187967187968044858Saccharopolyspora erythraea NRRL 2338, complete genometranscriptional regulator, XRE family1e-1687.4
NC_009380:4184695:419105441910544191791738Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein3e-1686.3
NC_016582:6509792:652268365226836523435753Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein1e-1584.3
NC_013929:7278414:728707572870757287953879Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-1584
NC_013510:2288746:229930422993042300185882Thermomonospora curvata DSM 43183, complete genomehelix-turn-helix domain protein2e-1583.6
NC_003888:6853107:685990068599006860775876Streptomyces coelicolor A3(2), complete genomeDNA-binding protein5e-1582
NC_014830:13179:256642566426587924Intrasporangium calvum DSM 43043 chromosome, complete genomehelix-turn-helix domain protein9e-1581.3
NC_016111:4613599:461942546194254620279855Streptomyces cattleya NRRL 8057, complete genomeDNA-binding protein2e-1480.5
NC_013510:3117837:314071431407143141526813Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family2e-1480.1
NC_003888:7337453:735751973575197358352834Streptomyces coelicolor A3(2), complete genomehypothetical protein3e-1479.7
NC_016582:10104458:101224921012249210123442951Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein3e-1479.7
NC_016111:1546505:156168615616861562519834Streptomyces cattleya NRRL 8057, complete genomeDNA-binding protein3e-1479.7
NC_016582:9551123:955614895561489556957810Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein3e-1479.3
NC_003155:3913789:391378939137893914658870Streptomyces avermitilis MA-4680, complete genomeDNA-binding protein4e-1479.3
NC_016582:9076686:908588090858809086767888Streptomyces bingchenggensis BCW-1 chromosome, complete genomeDNA-binding protein3e-1376.3
NC_007333:810381:818333818333818782450Thermobifida fusca YX, complete genomehypothetical protein5e-1375.5
NC_016114:907500:914418914418915302885Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehelix-turn-helix domain-containing protein8e-1374.7
NC_010572:1872840:188568418856841886526843Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA-binding protein2e-1273.9
NC_003155:5443230:546098954609895461831843Streptomyces avermitilis MA-4680, complete genomeDNA-binding protein2e-1273.6
NC_016582:4874500:489859048985904899270681Streptomyces bingchenggensis BCW-1 chromosome, complete genomeDNA-binding protein3e-1273.2
NC_016109:7445603:745160774516077452446840Kitasatospora setae KM-6054, complete genomeputative transcriptional regulator3e-1272.8
NC_013510:2937530:294657529465752947384810Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family3e-1272.8
NC_013510:465188:475826475826476707882Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family1e-1170.5
NC_016109:4753493:476778247677824768546765Kitasatospora setae KM-6054, complete genomehypothetical protein2e-1170.5
NC_003888:3111998:312441731244173125262846Streptomyces coelicolor A3(2), complete genomeregulatory protein7e-1168.6
NC_013947:4363250:436661243666124367442831Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehelix-turn-helix domain-containing protein7e-1168.2
NC_003155:6295078:630173663017366302587852Streptomyces avermitilis MA-4680, complete genomeDNA-binding protein1e-1067.8
NC_016111:1484424:148786814878681488752885Streptomyces cattleya NRRL 8057, complete genomeDNA-binding protein9e-1167.8
NC_013159:1225866:123908512390851239939855Saccharomonospora viridis DSM 43017, complete genomepredicted transcription factor, MBF1 like protein1e-1067.4
NC_016111:1546505:155441115544111555241831Streptomyces cattleya NRRL 8057, complete genomehypothetical protein7e-1065.1
NC_006361:4098469:410594941059494106791843Nocardia farcinica IFM 10152, complete genomeputative DNA-binding protein8e-1064.7
NC_021177:2766910:277838827783882779236849Streptomyces fulvissimus DSM 40593, complete genomePutative DNA-binding protein1e-0964.3
NC_013510:3640776:365281536528153653633819Thermomonospora curvata DSM 43183, complete genomehelix-turn-helix domain protein1e-0963.9
NC_016111:5515462:552138055213805521865486Streptomyces cattleya NRRL 8057, complete genomeHelix-turn-helix protein (fragment)2e-0963.5
NC_013929:3299736:334588333458833346713831Streptomyces scabiei 87.22 chromosome, complete genomeregulatory protein2e-0963.5
NC_016887:1093609:110105311010531101895843Nocardia cyriacigeorgica GUH-2, complete genomeputative DNA-binding protein6e-0962
NC_013929:1799594:182023918202391821093855Streptomyces scabiei 87.22 chromosome, complete genomeregulatory protein8e-0961.6
NC_010572:5445081:547300054730005473845846Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA-binding protein8e-0961.6
NC_013929:6343000:635192363519236352771849Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein9e-0961.2
NC_013510:465188:482165482165483013849Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family2e-0860.5
NC_014391:4644500:465076246507624651649888Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehelix-turn-helix domain-containing protein4e-0859.3
NC_016109:4455158:446682644668264467680855Kitasatospora setae KM-6054, complete genomeputative transcriptional regulator7e-0858.5
NC_021177:6127431:613261361326136133464852Streptomyces fulvissimus DSM 40593, complete genomeTranscriptional regulator1e-0757.8
NC_018524:301992:314254314254315090837Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehelix-turn-helix family protein2e-0757
NC_014210:2747787:275679127567912757561771Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, XRE family5e-0755.5
NC_003903:167825:178957178957179805849Streptomyces coelicolor A3(2) plasmid SCP1, complete sequencehypothetical protein7e-0755.1
NC_010572:8493946:444144415283843Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA-binding protein2e-0653.5
NC_010572:8493946:854064785406478541489843Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA-binding protein2e-0653.5
NC_010572:1:444144415283843Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA-binding protein2e-0653.5
NC_016109:6640000:664741066474106648264855Kitasatospora setae KM-6054, complete genomeputative transcriptional regulator6e-0652
NC_018524:301992:313568313568314176609Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeputative dNA-binding protein7e-0652