Some Help

Query: NC_013929:6526745:6528735 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 6528735, End: 6530117, Length: 1383

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015957:2726816:2743217274321727446471431Streptomyces violaceusniger Tu 4113 chromosome, complete genomesecretion protein snm43e-78293
NC_018524:2338000:2354716235471623560411326Nocardiopsis alba ATCC BAA-2165 chromosome, complete genometype VII secretion integral membrane protein EccD5e-24112
NC_010407:1114408:1119458111945811207681311Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative integral membrane protein7e-1479