Pre_GI: BLASTP Hits

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Query: NC_013929:6008072:6012281 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 6012281, End: 6012877, Length: 597

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016111:2257166:226529822652982265885588Streptomyces cattleya NRRL 8057, complete genome50S ribosomal protein L251e-64245
NC_016114:4333390:433740443374044337991588Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL51e-64245
NC_009664:1195630:121492912149291215558630Kineococcus radiotolerans SRS30216, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL53e-54211
NC_013715:1750403:176718117671811767840660Rothia mucilaginosa DY-18, complete genomeribosomal protein L257e-43173
NC_013947:1363078:137016713701671370784618Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL52e-42172
NC_014168:471000:489658489658490287630Segniliparus rotundus DSM 44985 chromosome, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL52e-33141
NC_004369:1051013:106982310698231070431609Corynebacterium efficiens YS-314, complete genome50S ribosomal protein L253e-28124
NC_014218:1663486:166348616634861664067582Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL57e-25113
NC_014654:2180994:220285322028532203533681Halanaerobium sp. 'sapolanicus' chromosome, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL58e-22103
NC_014643:1577021:157897215789721579268297Rothia dentocariosa ATCC 17931 chromosome, complete genomeribosomal L25p family protein5e-2097.4
NC_015733:864959:878238878238878831594Pseudomonas putida S16 chromosome, complete genome50S ribosomal protein L25/general stress protein Ctc9e-2096.7
NC_014733:2095996:210375921037592104376618Methylovorus sp. MP688 chromosome, complete genomeribosomal 5S rRNA e-loop binding protein ctc/l25/tl52e-1892
NC_012969:2136243:214182921418292142446618Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL52e-1892
NC_004578:1190000:121776012177601218371612Pseudomonas syringae pv. tomato str. DC3000, complete genome50S ribosomal protein L258e-1787
NC_019978:91483:103069103069103725657Halobacteroides halobius DSM 5150, complete genomeribosomal protein L25, Ctc-form2e-1685.9
NC_010084:534937:560996560996561601606Burkholderia multivorans ATCC 17616 chromosome 1, complete50S ribosomal protein L25/general stress protein Ctc2e-1685.9
NC_010804:2960352:296317229631722963777606Burkholderia multivorans ATCC 17616 chromosome 1, completelarge subunit ribosomal protein L252e-1685.9
NC_010725:2589014:261462726146272615313687Methylobacterium populi BJ001, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL53e-1685.1
NC_010170:4196197:422510142251014225724624Bordetella petrii, complete genome50S ribosomal protein L253e-1685.1
NC_010814:2758902:278068427806842781268585Geobacter lovleyi SZ, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL52e-1685.1
NC_012660:819381:832535832535833137603Pseudomonas fluorescens SBW25 chromosome, complete genome50S ribosomal protein L25/general stress protein Ctc3e-1684.7
NC_009434:3434381:343543034354303436047618Pseudomonas stutzeri A1501, complete genome50S ribosomal protein L25/general stress protein Ctc4e-1684.7
NC_012968:2000218:200232320023232002931609Methylotenera mobilis JLW8, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL55e-1684.3
NC_020209:47504:108771108771109382612Pseudomonas poae RE*1-1-14, complete genome50S ribosomal protein L25/general stress protein Ctc7e-1683.6
NC_017223:3345902:336891933689193369545627Bordetella pertussis CS chromosome, complete genome50S ribosomal protein L25/general stress protein Ctc2e-1582
NC_002929:3305682:332869933286993329325627Bordetella pertussis Tohama I, complete genome50S ribosomal protein L252e-1582
NC_010995:764567:781312781312781923612Cellvibrio japonicus Ueda107, complete genomeribosomal protein L25, Ctc-form2e-1582
NC_002927:960369:962550962550963164615Bordetella bronchiseptica RB50, complete genome50S ribosomal protein L254e-1581.3
NC_009656:5475540:547996554799655480579615Pseudomonas aeruginosa PA7 chromosome, complete genome50S ribosomal protein L25/general stress protein Ctc9e-1580.1
NC_015731:3658956:366175736617573662380624Nitrosomonas sp. Is79A3 chromosome, complete genome50S ribosomal protein L251e-1479.7
NC_009439:1174432:119176011917601192365606Pseudomonas mendocina ymp, complete genome50S ribosomal protein L25/general stress protein Ctc2e-1479
NC_010645:558974:560020560020560616597Bordetella avium 197N, complete genome50S ribosomal protein L25/general stress protein Ctc4e-1477.8
NC_009922:42696:489964899649571576Alkaliphilus oremlandii OhILAs, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL56e-1477.4
NC_015410:1202370:121752812175281218142615Pseudomonas mendocina NK-01 chromosome, complete genome50S ribosomal protein L25/general stress protein Ctc1e-1376.3
NC_017033:678321:679438679438680076639Frateuria aurantia DSM 6220 chromosome, complete genome50S ribosomal protein L252e-1375.1
NC_008710:819389:831188831188831736549Borrelia turicatae 91E135, complete genomeLSU ribosomal protein L25P5e-1374.3
NC_015572:4209000:424572442457244246338615Methylomonas methanica MC09 chromosome, complete genome50S ribosomal protein L256e-1373.9
NC_015573:162000:165573165573166208636Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome50S ribosomal protein L259e-1373.6
NC_012918:1697860:172822217282221728815594Geobacter sp. M21 chromosome, complete genome50S ribosomal protein L25/general stress protein Ctc1e-1273.2
NC_020419:1037899:104634610463461047065720Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, complete50S ribosomal protein L251e-1169.7
NS_000191:1037899:104634610463461047065720Uncultured Termite group 1 bacterium phylotype Rs-D17, complete50S ribosomal protein L251e-1169.7
NC_016112:3840053:388179238817923882412621Methylomicrobium alcaliphilum chromosome, complete genome50S ribosomal protein L256e-1167.4
NC_017094:828836:839914839914840516603Leptospirillum ferrooxidans C2-3, complete genome50S ribosomal protein L258e-1167
NC_006177:2398482:245348424534842454101618Symbiobacterium thermophilum IAM 14863, complete genome50S ribosomal protein L254e-1064.3
NC_010571:2943369:294772029477202948538819Opitutus terrae PB90-1, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL58e-1063.5
NC_007643:4294818:429481842948184295450633Rhodospirillum rubrum ATCC 11170, complete genomeRibosomal protein L251e-0962.8
NC_012121:139741:152742152742153386645Staphylococcus carnosus subsp. carnosus TM300, complete genome50S ribosomal protein L252e-0962.4
NC_009615:363285:380854380854381438585Parabacteroides distasonis ATCC 8503 chromosome, complete genome50S ribosomal protein L254e-0961.2
NC_011027:858565:860211860211860816606Chlorobaculum parvum NCIB 8327, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL55e-0960.8
NC_010067:660659:679844679844680128285Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-0960.5
NC_006511:682863:704403704403704687285Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC50S ribosomal protein L251e-0859.7
NC_010102:683444:719092719092719376285Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-0859.7
NC_011147:682897:704349704349704633285Salmonella enterica subsp. enterica serovar Paratyphi A str50S ribosomal protein L251e-0859.7
NC_016863:2324293:232617823261782326462285Salmonella enterica subsp. enterica serovar Typhimurium str. UK-150S ribosomal protein L251e-0859.7
NC_014618:1593360:160859116085911608875285Enterobacter cloacae SCF1 chromosome, complete genome50S ribosomal protein L252e-0859.3
NC_012673:77610:821268212682773648Exiguobacterium sp. AT1b, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL54e-0857.8
NC_009053:553298:556776556776557063288Actinobacillus pleuropneumoniae L20, complete genome50S ribosomal protein L251e-0756.6
NC_013171:1194500:121332512133251213978654Anaerococcus prevotii DSM 20548, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL51e-0756.6
NC_012917:1840172:188436018843601884644285Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeribosomal protein L259e-0856.6
NC_020054:3501467:350632635063263506889564Fibrella aestuarina BUZ 2 drat genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL51e-0756.2
NC_009828:469778:482203482203482853651Thermotoga lettingae TMO, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL51e-0756.2
NC_013961:2370994:237376823737682374052285Erwinia amylovora, complete genome50S ribosomal protein L252e-0755.5
NC_013971:2408522:241129624112962411580285Erwinia amylovora ATCC 49946 chromosome, complete genome50S ribosomal protein L252e-0755.5
NC_020064:3157656:316055131605513160835285Serratia marcescens FGI94, complete genomeribosomal protein L25 (general stress protein Ctc)4e-0754.7
NC_002937:1634287:165667516566751657247573Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeribosomal protein L256e-0753.9
NC_015566:3622385:362430436243043624588285Serratia sp. AS12 chromosome, complete genome50S ribosomal protein L252e-0652.8
NC_009617:1165539:117622811762281176797570Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL52e-0652.4
NC_015501:868909:871186871186871821636Porphyromonas asaccharolytica DSM 20707 chromosome, complete50S ribosomal protein L252e-0652
NC_009718:643200:670458670458671117660Fervidobacterium nodosum Rt17-B1, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL54e-0651.6
NC_016816:1545354:157642915764291576713285Pantoea ananatis LMG 5342, complete genome50S ribosomal protein L256e-0650.8