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Query: NC_013890:191616 Dehalococcoides sp. GT chromosome, complete genome

Start: 191616, End: 215221, Length: 23606

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Temp: Mesophile; Habitat: Fresh water, Groundwater. Dehalococcoides sp. GT was isolated from an chloroethene-contaminated aquifer. This strain can dechlorinate trichloroethene and vinyl chloride. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013890:53538*535388321229675Dehalococcoides sp. GT chromosome, complete genome010320BLASTN svgBLASTP svg
NC_014314:1148000*1148000118188033881Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, complete04419BLASTN svgBLASTP svg
NC_020387:14989014989017116121272Dehalococcoides mccartyi BTF08, complete genome1e-45192BLASTN svgBLASTP svg
NC_013552:20734520734522796020616Dehalococcoides sp. VS, complete genome5e-23117BLASTN svgBLASTP svg
NC_014011:13542611354261137432420064Aminobacterium colombiense DSM 12261 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_002936:149100*14910017314324044Dehalococcoides ethenogenes 195, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015499:14935001493500151659923100Thermodesulfobium narugense DSM 14796 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg