Pre_GI: BLASTP Hits

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Query: NC_013890:191616:202464 Dehalococcoides sp. GT chromosome, complete genome

Start: 202464, End: 202646, Length: 183

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Temp: Mesophile; Habitat: Fresh water, Groundwater. Dehalococcoides sp. GT was isolated from an chloroethene-contaminated aquifer. This strain can dechlorinate trichloroethene and vinyl chloride. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009455:173374:191300191300191470171Dehalococcoides sp. BAV1 chromosome, complete genome4e-24110
NC_008578:889907:895710895710895892183Acidothermus cellulolyticus 11B, complete genomeDNA binding domain, excisionase family1e-1891.7
NC_011662:1041725:104648610464861046695210Thauera sp. MZ1T, complete genomeexcision promoter, Xis5e-0959.7
NC_014314:238043:278609278609279148540Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeresponse regulator receiver protein9e-0958.9
NC_005139:2201820:222056022205602220736177Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein1e-0858.5
NC_007645:3581114:360687036068703607079210Hahella chejuensis KCTC 2396, complete genomepredicted transcriptional regulator2e-0857.8
NC_014844:1773424:178791317879131788101189Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeexcisionase family DNA-binding domain-containing protein2e-0857.8
NC_016616:1534983:155261115526111552883273Dechlorosoma suillum PS chromosome, complete genomeexcisionase family DNA-binding3e-0857.4
NC_010084:2484000:249887624988762499157282Burkholderia multivorans ATCC 17616 chromosome 1, completeDNA binding domain-containing protein3e-0857
NC_010804:996837:102561610256161025897282Burkholderia multivorans ATCC 17616 chromosome 1, completeputative excisionase3e-0857
NC_020418:116500:138018138018138203186Morganella morganii subsp. morganii KT, complete genomehypothetical protein5e-0856.6
NC_015186:491930:512700512700512894195Acidiphilium multivorum AIU301, complete genomehypothetical protein7e-0856.2
NC_008782:2683989:269945626994562699656201Acidovorax sp. JS42, complete genomephage transcriptional regulator, AlpA9e-0855.8
NC_008463:1293079:131714813171481317348201Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein9e-0855.8
NC_015578:3410367:342253734225373422725189Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein2e-0755.1
NC_015422:1876102:189556018955601895760201Alicycliphilus denitrificans K601 chromosome, complete genomeexcisionase family DNA binding domain-containing protein1e-0755.1
NC_016077:2044876:205574020557402055928189Acidaminococcus intestini RyC-MR95 chromosome, complete genomehypothetical protein2e-0754.3
NC_008752:166877:171086171086171298213Acidovorax avenae subsp. citrulli AAC00-1, complete genomeDNA binding domain, excisionase family4e-0753.5
NC_020260:882307:910527910527910808282Cronobacter sakazakii Sp291, complete genomephage transcriptional regulator6e-0752.8
NC_016620:781995:793788793788793967180Bacteriovorax marinus SJ, complete genomehypothetical protein6e-0752.8
NC_016112:364723:368711368711368905195Methylomicrobium alcaliphilum chromosome, complete genomeexcisionase1e-0652
NC_013890:53538:767677676776967201Dehalococcoides sp. GT chromosome, complete genomephage transcriptional regulator, AlpA1e-0651.6
NC_015500:1923514:196319519631951963845651Treponema brennaborense DSM 12168 chromosome, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN1e-0651.6
NC_009052:5089963:509377650937765094000225Shewanella baltica OS155, complete genomeputative transcriptional regulator1e-0651.6
NC_014650:603500:619661619661619846186Geobacillus sp. Y4.1MC1 chromosome, complete genomeexcisionase2e-0651.2
NC_009656:3817261:3830088383008838321182031Pseudomonas aeruginosa PA7 chromosome, complete genomeputative helicase2e-0651.2
NC_016077:2044876:205506420550642055315252Acidaminococcus intestini RyC-MR95 chromosome, complete genomehypothetical protein2e-0651.2
NC_009076:3564500:359821635982163598467252Burkholderia pseudomallei 1106a chromosome I, complete sequenceprophage CP4-57 regulatory protein (AlpA)4e-0650.4
NC_010424:422029:446411446411446767357Candidatus Desulforudis audaxviator MP104C, complete genomeDNA binding domain, excisionase family4e-0650.1
NC_014366:478000:491210491210491434225Gamma proteobacterium HdN1, complete genomeExcisionase, phage related4e-0650.1
NC_010674:3141228:314386831438683144821954Clostridium botulinum B str. Eklund 17B, complete genomeperiplasmic molybdate-binding protein/domain4e-0650.1