Pre_GI: BLASTN Hits

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Query: NC_013766:906550 Listeria monocytogenes 08-5578 chromosome, complete genome

Start: 906550, End: 925483, Length: 18934

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor".




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_016023:26758126758129361426034Bacillus coagulans 36D1 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015930:82134282134284322321882Lactococcus garvieae ATCC 49156, complete genome2e-19105BLASTN svgBLASTP svg
NC_003210:87058787058788950218916Listeria monocytogenes EGD-e, complete genome021270BLASTN svgBLASTP svg
NC_013891:57574657574659606620321Listeria seeligeri serovar 1/2b str. SLCC3954, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_014222:1188719*1188719121299924281Methanococcus voltae A3 chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_008577:10154191015419103464419226Shewanella sp. ANA-3 chromosome 1, complete sequence2e-0971.9BLASTN svgBLASTP svg
NC_008533:1380406*1380406140546125056Streptococcus pneumoniae D39, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_012466:1367099*1367099138959922501Streptococcus pneumoniae JJA, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_003098:1372875*1372875139793025056Streptococcus pneumoniae R6, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_012469:1403412*1403412142484321432Streptococcus pneumoniae Taiwan19F-14, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015958:2251619*2251619232072969111Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome1e-1075.8BLASTN svgBLASTP svg