Pre_GI: BLASTN Hits

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Query: NC_013316:2623199 Clostridium difficile R20291, complete genome

Start: 2623199, End: 2642260, Length: 19062

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014150:3085013*3085013310947924467Brachyspira murdochii DSM 12563 chromosome, complete genome1e-23119BLASTN svgBLASTP svg
NC_014330:20261932026193204718920997Brachyspira pilosicoli 95/1000 chromosome, complete genome2e-25125BLASTN svgBLASTP svg
NC_018607:66269766269768184019144Brachyspira pilosicoli B2904 chromosome, complete genome5e-29137BLASTN svgBLASTP svg
NC_019908:12256901225690124895123262Brachyspira pilosicoli P43/6/78 chromosome, complete genome1e-26129BLASTN svgBLASTP svg
NC_018604:78957578957581008920515Brachyspira pilosicoli WesB complete genome5e-29137BLASTN svgBLASTP svg
NC_012563:14640001464000148609922100Clostridium botulinum A2 str. Kyoto, complete genome6e-50206BLASTN svgBLASTP svg
NC_010520:14279811427981145070222722Clostridium botulinum A3 str. Loch Maree, complete genome1e-47198BLASTN svgBLASTP svg
NC_010520:3526883*3526883355123524353Clostridium botulinum A3 str. Loch Maree, complete genome2e-37165BLASTN svgBLASTP svg
NC_010516:13820001382000140409922100Clostridium botulinum B1 str. Okra, complete genome6e-50206BLASTN svgBLASTP svg
NC_014328:30666283066628308784821221Clostridium ljungdahlii ATCC 49587 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_014328:2990790*2990790303209941310Clostridium ljungdahlii ATCC 49587 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_020291:40330004033000405659923600Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome1e-1075.8BLASTN svgBLASTP svg
NC_014614:1259236*1259236127792218687Clostridium sticklandii, complete genome2e-46194BLASTN svgBLASTP svg
NC_019978:21893942189394220827218879Halobacteroides halobius DSM 5150, complete genome4e-20107BLASTN svgBLASTP svg
NC_013192:107672*10767213303725366Leptotrichia buccalis DSM 1135, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010718:49722249722251659019369Natranaerobius thermophilus JW/NM-WN-LF, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_003869:18126421812642183146018819Thermoanaerobacter tengcongensis MB4, complete genome1e-1179.8BLASTN svgBLASTP svg