Pre_GI: BLASTP Hits

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Query: NC_012917:1840172:1879807 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1879807, End: 1881555, Length: 1749

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012912:2800884:2802301280230128040731773Dickeya zeae Ech1591, complete genomesulfatase0822
NC_020064:3157656:3162362316236231641311770Serratia marcescens FGI94, complete genomeputative hydrolase of alkaline phosphatase superfamily0800
NC_015566:3622385:3626099362609936278801782Serratia sp. AS12 chromosome, complete genomesulfatase0775
NC_013971:2408522:2413138241313824148891752Erwinia amylovora ATCC 49946 chromosome, complete genomemembrane-associated sulfatase0754
NC_013961:2370994:2375610237561023773611752Erwinia amylovora, complete genomeInner membrane protein yejM0754
NC_016816:1545354:1573172157317215749261755Pantoea ananatis LMG 5342, complete genomeinner membrane protein YejM0744
NC_006511:682863:7004407004407022001761Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative sulphatase0708
NC_011147:682897:7003867003867021461761Salmonella enterica subsp. enterica serovar Paratyphi A strsulfatase0708
NC_010067:660659:6764806764806782401761Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0708
NC_011094:2348491:2348750234875023505101761Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein0707
NC_012125:1517925:1540022154002215417821761Salmonella enterica subsp. enterica serovar Paratyphi C strainsulfatase0707
NC_003197:2327474:2328920232892023306801761Salmonella typhimurium LT2, complete genomeputative hydrolase0706
NC_010102:683444:7151297151297168891761Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein0706
NC_011083:2375061:2376507237650723782671761Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,inner membrane protein YejM0706
NC_004631:685357:7076477076477094071761Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative sulphatase0706
NC_016810:2325190:2326636232663623283961761Salmonella enterica subsp. enterica serovar Typhimurium strputative sulfatase0706
NC_016832:687000:7076017076017093611761Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Inner membrane protein yejM0706
NC_016856:2379027:2380473238047323822331761Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative hydrolase0706
NC_016857:2325190:2326636232663623283961761Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative hydrolase0706
NC_016860:2323017:2324463232446323262231761Salmonella enterica subsp. enterica serovar Typhimurium strinner membrane protein YejM0706
NC_016863:2324293:2328665232866523304251761Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative hydrolase0706
NC_017046:2324554:2326000232600023277601761Salmonella enterica subsp. enterica serovar Typhimurium str. 798sulfatase0706
NC_011149:2294500:2294511229451122962711761Salmonella enterica subsp. enterica serovar Agona str. SL483,inner membrane protein YejM0705
NC_016831:687549:7095387095387112981761Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative sulfatase0704
NC_014618:1593360:1605401160540116071611761Enterobacter cloacae SCF1 chromosome, complete genomesulfatase0704
NC_004603:2235142:2237875223787522396831809Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein1e-124447
NC_014965:2200974:2202309220230922041291821Vibrio vulnificus MO6-24/O chromosome I, complete sequencehydrolase of alkaline phosphatase superfamily6e-121434
NC_011852:211314:2313162313162330521737Haemophilus parasuis SH0165, complete genomeputative sulphatase1e-108394
NC_008322:2716676:2718067271806727198571791Shewanella sp. MR-7, complete genomesulfatase1e-64248
NC_008577:2910383:2910383291038329121731791Shewanella sp. ANA-3 chromosome 1, complete sequencetRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase1e-64247
NC_008321:2649781:2650105265010526518951791Shewanella sp. MR-4, complete genomesulfatase1e-64247
NC_011663:2123388:2140468214046821422551788Shewanella baltica OS223 chromosome, complete genomesulfatase3e-62240
NC_009092:1684467:1695404169540416971911788Shewanella loihica PV-4, complete genomesulfatase4e-57223
NC_006512:728281:7325097325097341431635Idiomarina loihiensis L2TR, complete genomeMembrane-associated hydrolase of alkaline phosphatase superfamily1e-49198
NC_005139:305420:3066373066373084721836Vibrio vulnificus YJ016 chromosome I, complete sequencepredicted hydrolase1e-38161
NC_012108:1067876:1089653108965310915121860Desulfobacterium autotrophicum HRM2, complete genomeputative sulfatase (transmembrane protein)9e-33142
NC_020126:7255111:7256172725617272580851914Myxococcus stipitatus DSM 14675, complete genomehypothetical protein5e-0653.1