Pre_GI: BLASTP Hits

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Query: NC_012917:1840172:1872977 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1872977, End: 1873969, Length: 993

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007520:407627:416071416071416859789Thiomicrospira crunogena XCL-2, complete genomeTIR5e-36151
NC_018581:32092:4350543505451091605Gordonia sp. KTR9 chromosome, complete genomeconserved hypothetical protein, TIR superfamily2e-1170.5
NC_013406:303218:3147043147043162601557Paenibacillus sp. Y412MC10 chromosome, complete genomeATPase2e-1067
NC_007907:5185510:520507752050775205943867Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-1065.9
NC_007618:724238:739186739186740019834Brucella melitensis biovar Abortus 2308 chromosome I, completehypothetical protein4e-1065.9
NC_015857:731982:747946747946748779834Brucella pinnipedialis B2/94 chromosome chromosome 1, completehypothetical protein4e-1065.9
NC_004310:706238:721187721187722020834Brucella suis 1330 chromosome I, complete sequencehypothetical protein4e-1065.9
NC_013119:707804:724470724470725303834Brucella microti CCM 4915 chromosome 1, complete sequencehypothetical protein4e-1065.9
NC_016797:706980:721118721118721951834Brucella suis VBI22 chromosome I, complete sequencehypothetical protein4e-1065.9
NC_017251:707000:721173721173722006834Brucella suis 1330 chromosome I, complete genomehypothetical protein4e-1065.9
NC_006932:727943:742846742846743724879Brucella abortus biovar 1 str. 9-941 chromosome I, completehypothetical protein5e-1065.5
NC_010742:726146:741164741164742042879Brucella abortus S19 chromosome 1, complete sequencehypothetical protein5e-1065.5
NC_010103:704875:719483719483720361879Brucella canis ATCC 23365 chromosome I, complete sequencehypothetical protein5e-1065.5
NC_010169:725152:740055740055740933879Brucella suis ATCC 23445 chromosome I, complete sequencehypothetical protein5e-1065.5
NC_016778:329288:332984332984333862879Brucella canis HSK A52141 chromosome 1, complete sequencehypothetical protein5e-1065.5
NC_016795:1673464:167436216743621675240879Brucella abortus A13334 chromosome 1, complete sequencehypothetical protein5e-1065.5
NC_009505:727694:744185744185745162978Brucella ovis ATCC 25840 chromosome I, complete sequencehypothetical protein6e-1065.1
NC_014364:3001597:3016737301673730182181482Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeAAA ATPase1e-0963.9
NC_017047:1551836:1575238157523815767791542Rahnella aquatilis HX2 chromosome, complete genomeATPase3e-0962.8
NC_003317:1263562:126444612644461264982537Brucella melitensis 16M chromosome I, complete sequenceHypothetical Cytosolic Protein9e-0961.2
NC_017246:727143:742078742078742956879Brucella melitensis M5-90 chromosome chromosome I, completehypothetical protein2e-0860.1
NC_017244:726893:741828741828742706879Brucella melitensis M28 chromosome chromosome 1, complete sequencehypothetical protein2e-0860.1
NC_012441:727500:741820741820742698879Brucella melitensis ATCC 23457 chromosome I, complete sequencehypothetical protein2e-0860.1
NC_017248:721764:738247738247739224978Brucella melitensis NI chromosome chromosome I, complete sequencehypothetical protein2e-0860.1
NC_003296:140889:1505181505181520831566Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein4e-0859.3
NC_019673:2051363:212703521270352127961927Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein6e-0858.5