Pre_GI: BLASTP Hits

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Query: NC_012917:1840172:1867012 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1867012, End: 1868124, Length: 1113

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014500:3175283:3195996319599631971081113Dickeya dadantii 3937 chromosome, complete genomeputative molybdenum cofactor synthesis-step 1 protein isoform 20752
NC_011283:4438500:4466780446678044678921113Klebsiella pneumoniae 342 chromosome, complete genomeradical SAM protein5e-164577
NC_009792:3245368:3272233327223332733451113Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-163576
NC_009436:3117661:3133141313314131342531113Enterobacter sp. 638, complete genomeradical SAM protein1e-163575
NC_012214:2805297:2816319281631928174371119Erwinia pyrifoliae Ep1/96, complete genomeRadical SAM domain protein1e-155549
NC_013941:3300000:331755033175503318521972Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-144511
NC_009349:3396:1641216412176171206Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completeradical SAM domain-containing protein2e-53210
NC_015379:89441:1035301035301046931164Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein1e-53210
NC_015556:2265940:2315748231574823169771230Pseudomonas fulva 12-X chromosome, complete genomeRadical SAM domain protein3e-53209
NC_016616:2997348:3016497301649730176511155Dechlorosoma suillum PS chromosome, complete genomeHis-Xaa-Ser repeat-associated downstream radical SAM protein4e-53208
NC_011769:3434744:3446611344661134477651155Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeRadical SAM domain protein7e-51201
NC_009659:1129066:1139949113994911410431095Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein4e-50199
NC_009615:2503465:2530033253003325311751143Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein3e-46186
NC_018000:4958637:4966374496637449674621089Sinorhizobium fredii USDA 257 chromosome, complete genomehypothetical protein4e-43175
NC_011565:665515:6876946876946888301137Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,hypothetical protein1e-39164
NC_014387:2297304:2315638231563823167381101Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeradical SAM domain-containing protein2e-35149
NC_016948:2129335:213946821394682139791324Mycobacterium intracellulare MOTT-64 chromosome, complete genomeradical SAM domain-containing protein3e-1686.3
NC_002754:1661000:1665410166541016665461137Sulfolobus solfataricus P2, complete genomeCoenzyme PQQ synthesis protein E (pqqE-4)4e-1272.8
NC_012622:940990:9590429590429601781137Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeradical SAM protein2e-1067
NC_012623:1631985:1631985163198516331211137Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeradical SAM protein2e-1067
NC_008701:37219:4525245252464211170Pyrobaculum islandicum DSM 4184, complete genomeRadical SAM domain protein1e-0964.3
NC_014844:1773424:1786864178686417879161053Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeRadical SAM domain-containing protein7e-0858.5
NC_009033:653462:6708496708496723691521Staphylothermus marinus F1, complete genomeRadical SAM domain protein2e-0757
NC_008553:329458:3473143473143483931080Methanosaeta thermophila PT, complete genomeRadical SAM domain protein2e-0653.5
NC_015500:484984:4982864982864998001515Treponema brennaborense DSM 12168 chromosome, complete genomeRadical SAM domain protein6e-0652