Pre_GI: BLASTP Hits

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Query: NC_012917:1840172:1855415 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1855415, End: 1855825, Length: 411

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:1819036:185411818541181854528411Pectobacterium wasabiae WPP163, complete genomehypothetical protein3e-62236
NC_011283:4438500:445869544586954459117423Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein1e-39161
NC_013941:3300000:333109133310913331561471Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-38157
NC_002695:3468873:349335934933593493772414Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-38157
NC_013008:3525428:355232035523203552733414Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-38157
NC_002655:3538656:356064335606433561113471Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-38157
NC_011353:3573641:359759535975953598065471Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein2e-38157
NC_012125:4716000:472722747272274727640414Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein8e-32135
NC_006905:4638707:464994746499474650324378Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein3e-27120
NC_016816:1545354:156135815613581561765408Pantoea ananatis LMG 5342, complete genomehypothetical protein5e-0856.6