Pre_GI: BLASTP Hits

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Query: NC_012917:1840172:1853169 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1853169, End: 1854854, Length: 1686

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008800:1090000:1101870110187011037291860Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,DNA-binding protein0697
NC_010067:191190:2029042029042047781875Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-159562
NC_011741:4570498:4583846458384645857201875Escherichia coli IAI1 chromosome, complete genomeputative integrase6e-158557
CU928160:4570498:4583846458384645857201875Escherichia coli IAI1 chromosome, complete genomeputative integrase6e-158557
NC_009436:3117661:3141163314116331430371875Enterobacter sp. 638, complete genomeDNA-binding protein7e-157554
NC_014562:2563466:2591394259139425932321839Pantoea vagans C9-1 chromosome, complete genomeTransposase B from transposon Tn5542e-107389
NC_016816:1545354:1555375155537515574082034Pantoea ananatis LMG 5342, complete genomeDNA-binding protein3e-105382
NC_013008:3525428:3553230355323035548611632Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-103377
NC_011353:3573641:3598505359850536001361632Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeDNA-binding protein1e-103377
NC_002695:3468873:3494269349426934959001632Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-103377
NC_013941:3300000:3332001333200133336321632Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeDNA-binding protein2e-101369
NC_013421:1819036:1852002185200218536211620Pectobacterium wasabiae WPP163, complete genomehypothetical protein6e-101368
NC_011283:4438500:4459610445961044612411632Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein1e-99363
NC_002655:3538656:3561775356177535631871413Escherichia coli O157:H7 EDL933, complete genomehypothetical protein4e-95349
NC_009524:1369395:1377817137781713797841968Psychrobacter sp. PRwf-1 chromosome, complete genomehypothetical protein4e-77289
NC_004547:1174650:1189894118989411918581965Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative integrase4e-74279
NC_015726:406450:4168814168814189592079Cupriavidus necator N-1 chromosome 1, complete sequenceintegrase8e-74278
NC_010322:583842:5922595922595943282070Pseudomonas putida GB-1 chromosome, complete genomeintegrase family protein9e-70265
NC_003919:3396136:3406559340655934084091851Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein1e-68261
NC_020829:636773:6446296446296466111983Pseudomonas denitrificans ATCC 13867, complete genomeintegrase family protein4e-68259
NC_015458:2998000:3005609300560930076182010Pusillimonas sp. T7-7 chromosome, complete genomeintegrase family protein2e-63244
NC_009792:3665369:3685946368594636876131668Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-53210
NC_016514:3573400:3595476359547635968071332Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein1e-50201
NC_012880:3421500:3435298343529834369561659Dickeya dadantii Ech703, complete genomehypothetical protein4e-47189
NC_014640:6815264:6837004683700468390132010Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein9e-47188
NC_011663:674069:6792846792846813652082Shewanella baltica OS223 chromosome, complete genomehypothetical protein2e-35151
NC_009665:639914:6451236451236472042082Shewanella baltica OS185 chromosome, complete genomehypothetical protein2e-35151
NC_005773:4282840:4292503429250342943741872Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein1e-32141
NC_015563:2018038:2028877202887720309462070Delftia sp. Cs1-4 chromosome, complete genomeintegrase family protein2e-23110
NC_014394:2577949:2593443259344325953741932Gallionella capsiferriformans ES-2 chromosome, complete genomehypothetical protein6e-22106
NC_005773:4899252:4904499490449949067332235Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein7e-21102
NC_010571:2943369:2953324295332429553392016Opitutus terrae PB90-1, complete genomehypothetical protein3e-20100
NC_014311:3076519:3113502311350231155562055Ralstonia solanacearum PSI07 chromosome, complete genomephage integrase6e-2099.4
NC_004578:5192110:5198455519845552006922238Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein4e-1996.7
NC_020829:940692:9877309877309899672238Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein5e-1892.8
NC_008740:2563278:2577558257755825797052148Marinobacter aquaeolei VT8, complete genomehypothetical protein2e-1687.4
NC_014752:834616:846608846608847522915Neisseria lactamica ST-640, complete genomehypothetical protein5e-1479.7
NC_020209:1949500:1958027195802719601412115Pseudomonas poae RE*1-1-14, complete genomehypothetical protein7e-1169.3
NC_006350:595893:6339776339776359321956Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein2e-0964.7
NC_014366:478000:4868774868774888862010Gamma proteobacterium HdN1, complete genomeputative integrase5e-0860.1
NC_004129:3452885:3464703346470334670092307Pseudomonas fluorescens Pf-5, complete genomehypothetical protein8e-0755.8
NC_014752:834616:846086846086846538453Neisseria lactamica ST-640, complete genomehypothetical protein2e-0654.7