Pre_GI: BLASTP Hits

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Query: NC_012917:1840172:1843503 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1843503, End: 1844933, Length: 1431

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:3117639:3131759313175931331831425Pectobacterium wasabiae WPP163, complete genomeMATE efflux family protein0826
NC_013592:1668092:1689904168990416913401437Dickeya dadantii Ech586, complete genomeMATE efflux family protein0691
NC_012880:1765920:1786595178659517881031509Dickeya dadantii Ech703, complete genomeMATE efflux family protein0683
NC_009436:2776410:2778429277842927798711443Enterobacter sp. 638, complete genomehypothetical protein6e-164577
NC_010067:892729:8927298927298941591431Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-156550
NC_009800:2083465:2096806209680620984461641Escherichia coli HS, complete genomeMATE efflux family protein1e-155550
NC_012947:1769438:1774970177497017764571488Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein1e-155549
NC_000913:2042935:2056227205622720578701644Escherichia coli K12, complete genomepredicted multidrug efflux system3e-155548
NC_010473:2119480:2147235214723521488781644Escherichia coli str. K-12 substr. DH10B, complete genomepredicted multidrug efflux system3e-155548
AC_000091:2027648:2060340206034020619831644Escherichia coli W3110 DNA, complete genomepredicted multidrug efflux system3e-155548
NC_012759:1920955:1948710194871019503531644Escherichia coli BW2952 chromosome, complete genomehypothetical protein3e-155548
NC_012967:1967675:1996203199620319978461644Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein3e-155548
NC_011601:2139188:2173238217323821748781641Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein5e-155547
NC_016822:2201388:2233186223318622348261641Shigella sonnei 53G, complete genomeMATE family multidrug exporter5e-155547
NC_010468:1816359:1848651184865118501381488Escherichia coli ATCC 8739, complete genomeMATE efflux family protein3e-154545
NC_011745:2209288:2235917223591722375601644Escherichia coli ED1a chromosome, complete genomehypothetical protein7e-154544
NC_014618:1809369:1828855182885518302791425Enterobacter cloacae SCF1 chromosome, complete genomeMATE efflux family protein2e-153543
NC_020181:527592:5683845683845698231440Enterobacter aerogenes EA1509E, complete genomePutative inner membrane protein2e-151536
NC_016612:5231065:5250298525029852517551458Klebsiella oxytoca KCTC 1686 chromosome, complete genomeMATE family multidrug exporter1e-150533
NC_013850:1753716:1776480177648017779491470Klebsiella variicola At-22 chromosome, complete genomeMATE efflux family protein7e-150530
NC_011205:2180598:2224801222480122263271527Salmonella enterica subsp. enterica serovar Dublin str. CT_020218531e-148526
NC_011294:2053991:2097788209778820992451458Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-148526
NC_016832:948029:9512479512479527731527Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,MATE efflux3e-148525
NC_011274:2044000:2088921208892120903781458Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-148525
NC_004631:948054:9513629513629528191458Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative inner membrane protein3e-148525
NC_011094:2061000:2064750206475020662761527Salmonella enterica subsp. enterica serovar Schwarzengrund strmate efflux family protein6e-148524
NC_017179:4023139:4023139402313940244971359Clostridium difficile BI1, complete genomemultidrug resistance protein1e-64247
NC_013315:4015119:4015119401511940164771359Clostridium difficile CD196 chromosome, complete genomemultidrug resistance protein1e-64247
NC_013316:4095905:4095905409590540972631359Clostridium difficile R20291, complete genomeputative multidrug resistance protein1e-64247
NC_015578:3561838:3578415357841535797581344Treponema primitia ZAS-2 chromosome, complete genomeMATE efflux family protein2e-39164
NC_012778:1778654:1800244180024418015931350Eubacterium eligens ATCC 27750, complete genomemultidrug resistance protein, MATE family2e-38160
NC_009922:944538:9660059660059674081404Alkaliphilus oremlandii OhILAs, complete genomeMATE efflux family protein6e-37155
NC_012914:469117:4957944957944971881395Paenibacillus sp. JDR-2, complete genomeMATE efflux family protein2e-24114
NC_015474:328500:3403903403903417811392Pyrococcus sp. NA2 chromosome, complete genomeDNA damage-inducible protein5e-24112
NC_016935:976059:9784369784369798271392Paenibacillus mucilaginosus 3016 chromosome, complete genomeMATE efflux family protein3e-23110
NC_011899:1969187:1973825197382519751531329Halothermothrix orenii H 168, complete genomeMATE efflux family protein8e-21102
NC_012471:51305:6667366673679831311Streptococcus equi subsp. equi 4047, complete genomemulti antimicrobial extrusion (MATE) family transporter1e-1997.8
NC_012438:1564794:1578334157833415796591326Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomesodium-driven multidrug efflux pump protein4e-1893.2
NC_020063:2785652:2789029278902927903691341Enterobacteriaceae bacterium strain FGI 57, complete genomeputative efflux protein, MATE family2e-1790.5
NC_014019:2661000:2671475267147526729021428Bacillus megaterium QM B1551 chromosome, complete genomeMATE efflux family protein6e-1789.4
NC_014103:2635695:2650881265088126522751395Bacillus megaterium DSM319 chromosome, complete genomeMATE efflux family protein8e-1789
NC_012925:275704:2777602777602790371278Streptococcus suis P1/7, complete genomemulti antimicrobial extrusion (MATE) family transporter2e-1687.4
NC_012924:277325:2773252773252786021278Streptococcus suis SC84, complete genomemulti antimicrobial extrusion (MATE) family transporter2e-1687.4
NC_009443:277246:2772462772462785291284Streptococcus suis 98HAH33, complete genomeNa+-driven multidrug efflux pump3e-1687
NC_009442:277392:2773922773922786751284Streptococcus suis 05ZYH33 chromosome, complete genomeNa+-driven multidrug efflux pump3e-1687
NC_009785:130252:1463971463971476741278Streptococcus gordonii str. Challis substr. CH1, complete genomeMulti antimicrobial extrusion family transporter, putative3e-1687
NC_019897:3467618:3468591346859134699671377Thermobacillus composti KWC4 chromosome, complete genomeefflux protein, MATE family3e-1686.7
NC_015433:285581:2882272882272895041278Streptococcus suis ST3 chromosome, complete genomeMATE efflux family protein8e-1685.5
NC_011134:51218:676716767168417747Streptococcus equi subsp. zooepidemicus str. MGCS10565, completemulti antimicrobial extrusion (MATE) family transporter3e-1583.6
NC_016935:7426389:7446133744613374475031371Paenibacillus mucilaginosus 3016 chromosome, complete genomeMATE efflux family protein7e-1582.4
NC_015690:7334786:7354044735404473554141371Paenibacillus mucilaginosus KNP414 chromosome, complete genomeMATE efflux family protein7e-1582.4
NC_014387:1106901:1121574112157411229321359Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeMatE efflux family protein6e-1582.4
NC_012440:1080675:1096173109617310974771305Persephonella marina EX-H1, complete genomesodium-driven multidrug efflux pump protein2e-1377.4
NC_017095:1461520:1477155147715514785011347Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeputative efflux protein, MATE family2e-1377.4
NC_019978:922978:9229789229789243481371Halobacteroides halobius DSM 5150, complete genomeputative efflux protein, MATE family7e-1375.9
NC_013282:2026083:2066597206659720679701374Cronobacter turicensis, complete genomeMultidrug resistance protein mdtK2e-1273.9
NC_016632:830000:8341658341658355321368Serratia symbiotica str. 'Cinara cedri' chromosome, completemultidrug resistance protein, MATE family2e-1273.9
NC_020260:1993344:1999315199931520006881374Cronobacter sakazakii Sp291, complete genomemultidrug efflux protein5e-1272.8
NC_006177:835459:8532008532008544501251Symbiobacterium thermophilum IAM 14863, complete genomeNa+-driven multidrug efflux protein6e-1272.4
NC_013192:815854:8355898355898369621374Leptotrichia buccalis DSM 1135, complete genomeMATE efflux family protein1e-1171.6
NC_015921:481532:4914454914454928091365Borrelia bissettii DN127 chromosome, complete genomeMATE efflux family protein2e-1171.2
NC_009778:1956225:1962339196233919637121374Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-1170.9
NC_006156:484951:4949224949224962801359Borrelia garinii PBi chromosome linear, complete sequencehypothetical protein2e-1170.5
NC_011728:477439:4886834886834900471365Borrelia burgdorferi ZS7, complete genomehypothetical protein3e-1170.5
NC_001318:479709:4925884925884939521365Borrelia burgdorferi B31, complete genomehypothetical protein3e-1170.5
NC_013967:1687825:1691338169133816928041467Haloferax volcanii DS2 chromosome, complete genomemulti antimicrobial extrusion family drug/sodium antiporter3e-1170.1
NC_008555:1874878:1896395189639518977651371Listeria welshimeri serovar 6b str. SLCC5334, complete genomeMATE efflux family protein3e-1170.1
NC_010067:1507823:1513432151343215148051374Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-1169.7
NC_013656:2382000:2396307239630723975091203Lactococcus lactis subsp. lactis KF147, complete genomeNa+ driven multidrug efflux pump1e-1068.6
NC_013204:3613824:1158611586132531668Eggerthella lenta DSM 2243, complete genomemulti antimicrobial extrusion protein MatE1e-1068.6
NC_016776:2549465:2557338255733825587711434Bacteroides fragilis 638R, complete genomeputative cation efflux protein1e-1068.2
NC_014218:1948165:1951781195178119531151335Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeMATE efflux family protein1e-1068.2
NC_003228:2473956:2482540248254024839731434Bacteroides fragilis NCTC 9343, complete genomeputative cation efflux protein2e-1067.8
NC_014752:1530000:1551758155175815531371380Neisseria lactamica ST-640, complete genometransmembrane efflux protein3e-1067
NC_010102:1616530:1618578161857816199511374Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-1067
NC_011149:1710601:1712649171264917140221374Salmonella enterica subsp. enterica serovar Agona str. SL483,multidrug resistance protein NorM3e-1067
NC_011094:1435347:1465876146587614672491374Salmonella enterica subsp. enterica serovar Schwarzengrund strmultidrug efflux protein3e-1067
NC_003198:1621347:1623395162339516247681374Salmonella enterica subsp. enterica serovar Typhi str. CT18,multidrug efflux protein NorA4e-1066.6
NC_011205:1852665:1854713185471318560861374Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853multidrug efflux protein4e-1066.6
NC_011274:1763676:1765724176572417670971374Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91multidrug efflux protein4e-1066.6
NC_011294:1723852:1725900172590017272731374Salmonella enterica subsp. enterica serovar Enteritidis strmultidrug efflux protein4e-1066.6
NC_012125:2360815:2362863236286323642361374Salmonella enterica subsp. enterica serovar Paratyphi C strainmultidrug efflux protein4e-1066.6
NC_016831:1236786:1267335126733512687081374Salmonella enterica subsp. enterica serovar Gallinarum/pullorummultidrug-efflux transporter4e-1066.6
NC_016856:1481325:1511938151193815133111374Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Smultidrug efflux protein4e-1066.6
NC_016860:1469066:1499649149964915010221374Salmonella enterica subsp. enterica serovar Typhimurium strmultidrug efflux system protein4e-1066.6
NC_016863:1429516:1460129146012914615021374Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1multidrug efflux protein4e-1066.6
NC_008277:485299:4964494964494978131365Borrelia afzelii PKo, complete genomehypothetical protein4e-1066.6
NC_017238:482222:4950084950084963721365Borrelia afzelii PKo chromosome, complete genomeMATE efflux family protein4e-1066.6
NC_011244:497212:5126435126435140011359Borrelia recurrentis A1, complete genomehypothetical protein5e-1066.2
NC_014732:141000:1419871419871434591473Halogeometricum borinquense DSM 11551 plasmid pHBOR04, completeefflux protein, MATE family7e-1065.9
NC_006511:1506915:1508963150896315103361374Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCmultidrug efflux protein NorA6e-1065.9
NC_011147:1502096:1504144150414415055171374Salmonella enterica subsp. enterica serovar Paratyphi A strmultidrug efflux protein6e-1065.9
NC_012658:99899:99899998991012361338Clostridium botulinum Ba4 str. 657 chromosome, complete genomeMATE efflux family protein8e-1065.5
NC_011080:1470794:1501402150140215027751374Salmonella enterica subsp. enterica serovar Newport str. SL254,multidrug resistance protein NorM9e-1065.5
NC_002973:1877905:1901813190181319031831371Listeria monocytogenes str. 4b F2365, complete genomemultidrug efflux protein NorA2e-0964.3
NC_003197:1471349:1501962150196215033351374Salmonella typhimurium LT2, complete genomemultidrug efflux protein NorA2e-0964.3
NC_020063:2077233:2099975209997521013481374Enterobacteriaceae bacterium strain FGI 57, complete genomeputative efflux protein, MATE family3e-0963.9
NC_013768:1983711:2007604200760420089951392Listeria monocytogenes 08-5923, complete genomemultidrug efflux protein3e-0963.5
NC_018750:3988196:4005988400598840073251338Streptomyces venezuelae ATCC 10712, complete genomeputative DNA-damage-inducible protein F6e-0962.8
NC_010673:479552:4979074979074992531347Borrelia hermsii DAH, complete genomeNa+ driven multidrug efflux pump5e-0962.8
NC_015496:1288377:1311639131163913129851347Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeMATE efflux family protein1e-0862
NC_014722:1191380:1206060120606012074061347Burkholderia rhizoxinica HKI 454, complete genomeNa+ driven multidrug efflux pump2e-0860.8
NC_016631:2112175:2113886211388621153041419Granulicella mallensis MP5ACTX8 chromosome, complete genomeMATE efflux family protein3e-0860.5
NC_015977:2807782:2811790281179028132171428Roseburia hominis A2-183 chromosome, complete genomeMATE family multidrug resistance protein3e-0860.5
NC_021177:4041915:4063122406312240644591338Streptomyces fulvissimus DSM 40593, complete genomeDNA-damage-inducible protein F3e-0860.5
NC_008261:381297:3934183934183948571440Clostridium perfringens ATCC 13124, complete genomeMATE efflux family protein3e-0860.1
NC_013891:1861294:1880643188064318820131371Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomemultidrug resistance protein, putative4e-0860.1
NC_015500:484984:5110885110885124341347Treponema brennaborense DSM 12168 chromosome, complete genomeMATE efflux family protein6e-0859.3
NC_019908:1225690:1243153124315312445411389Brachyspira pilosicoli P43/6/78 chromosome, complete genomeMATE efflux family protein5e-0859.3
NC_015425:718384:7373357373357385731239Clostridium botulinum BKT015925 chromosome, complete genomeNa+-driven multidrug efflux pump8e-0858.9
NC_008836:2780339:2802823280282328042291407Burkholderia mallei NCTC 10229 chromosome II, complete sequencemultidrug efflux pump NorM8e-0858.9
NC_007498:2618131:2623969262396926253631395Pelobacter carbinolicus DSM 2380, complete genomeNa+-driven multidrug efflux pump1e-0758.5
NC_019962:2129393:2151904215190421533881485Natrinema pellirubrum DSM 15624, complete genomeputative efflux protein, MATE family1e-0758.5
NC_016048:987699:9908869908869922861401Oscillibacter valericigenes Sjm18-20, complete genomeMatE efflux family protein1e-0758.2
NC_013192:63111:8642786427877461320Leptotrichia buccalis DSM 1135, complete genomeMATE efflux family protein2e-0757.8
NC_013416:939668:9435589435589449551398Aggregatibacter actinomycetemcomitans D11S-1, complete genomemultidrug resistance protein MdtK (Multidrug-efflux transporter)4e-0756.6
NC_008710:488815:4953954953954967831389Borrelia turicatae 91E135, complete genomeNa+ driven multidrug efflux pump6e-0756.2
NC_009615:1601170:1603518160351816048641347Parabacteroides distasonis ATCC 8503 chromosome, complete genomemultidrug efflux transport protein6e-0755.8
NC_012029:1525929:1548376154837615500401665Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genomeMATE efflux family protein7e-0755.8
NC_003888:4251867:4305060430506043064061347Streptomyces coelicolor A3(2), complete genomehypothetical protein7e-0755.8
NC_010001:473354:4861044861044874591356Clostridium phytofermentans ISDg, complete genomeMATE efflux family protein8e-0755.5
NC_015737:53682:5679356793582141422Clostridium sp. SY8519, complete genomehypothetical protein8e-0755.5
NC_005139:1784000:1785109178510917865601452Vibrio vulnificus YJ016 chromosome I, complete sequencemultidrug efflux protein NorA1e-0655.1
NC_014500:3097362:3104536310453631059151380Dickeya dadantii 3937 chromosome, complete genomeNa+ driven multidrug efflux pump1e-0655.1
NC_014377:480158:5245855245855259761392Thermosediminibacter oceani DSM 16646 chromosome, complete genomeMATE efflux family protein1e-0654.7
NC_015671:3470903:3492303349230334936611359Cellvibrio gilvus ATCC 13127 chromosome, complete genomeMATE efflux family protein2e-0654.3
NC_015977:255029:2698972698972710481152Roseburia hominis A2-183 chromosome, complete genomeMATE efflux family protein2e-0654.3
NC_012781:1968827:2001437200143720027981362Eubacterium rectale ATCC 33656, complete genomehypothetical protein2e-0653.9
NC_016111:3308310:3317742331774233191121371Streptomyces cattleya NRRL 8057, complete genomeDNA-damage-inducible protein F3e-0653.9
NC_003454:128000:1477421477421490791338Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeNa+ driven multidrug efflux pump3e-0653.9
NC_020291:397696:4002504002504016321383Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeMATE efflux family protein6e-0652.8
NC_014541:475350:5317815317815331271347Ferrimonas balearica DSM 9799 chromosome, complete genomeMATE efflux family protein7e-0652.4