Pre_GI: BLASTP Hits

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Query: NC_012917:1840172:1841436 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1841436, End: 1841951, Length: 516

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013716:5201097:525252552525255253100576Citrobacter rodentium ICC168, complete genomeputative virulence-related outer membrane protein1e-1995.9
NC_012779:3176820:321597332159733216620648Edwardsiella ictaluri 93-146, complete genomeresistance to complement killing5e-1270.5
NC_012779:2928000:293249129324912933036546Edwardsiella ictaluri 93-146, complete genomehypothetical protein8e-1166.6
NC_014618:4312295:433423443342344334782549Enterobacter cloacae SCF1 chromosome, complete genomevirulence-related outer membrane protein7e-1889.7
NC_008563:1505405:150887115088711509470600Escherichia coli APEC O1, complete genomeputative outer membrane protein of prophage6e-1476.6
NC_012967:1593101:160594716059471606546600Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein3e-1374.3
NC_004431:1352906:136824413682441368843600Escherichia coli CFT073, complete genomePutative Lom-like outer membrane protein of prophage6e-1580.1
NC_004431:3012668:302704330270433027642600Escherichia coli CFT073, complete genomePutative outer membrane protein of prophage1e-1479
NC_009800:1657550:166139116613911661990600Escherichia coli HS, complete genomeenterobacterial Ail/Lom family protein4e-1374.3
NC_011750:1931384:193600819360081936607600Escherichia coli IAI39 chromosome, complete genomeputative Lom-like outer membrane protein of prophage1e-1479.3
NC_011750:919953:932398932398932997600Escherichia coli IAI39 chromosome, complete genomeputative Lom-like outer membrane protein of prophage6e-1580.1
AP010958:604719:608184608184608783600Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative outer membrane precursor Lom2e-1375.5
AP010958:2134556:214717221471722147771600Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative outer membrane precursor Lom4e-1270.9
AP010958:3627355:363308936330893633499411Escherichia coli O103:H2 str. 12009 DNA, complete genomePagC-like membrane protein1e-1479.3
AP010958:5090696:511354151135415113951411Escherichia coli O103:H2 str. 12009 DNA, complete genomePagC-like protein1e-1479.3
AP010958:867869:872034872034872633600Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative outer membrane precursor Lom4e-1270.9
AP010958:1472506:148661214866121487211600Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative outer membrane precursor Lom4e-1270.9
AP010958:1305712:131013313101331310771639Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative outer membrane precursor Lom6e-1373.6
AP010958:922937:924979924979925494516Escherichia coli O103:H2 str. 12009 DNA, complete genomeouter membrane protein X1e-49195
NC_013353:5090696:511354151135415113951411Escherichia coli O103:H2 str. 12009, complete genomePagC-like protein1e-1479.3
NC_013353:1305712:131013313101331310771639Escherichia coli O103:H2 str. 12009, complete genomeouter membrane precursor Lom6e-1373.6
NC_013353:922937:924979924979925494516Escherichia coli O103:H2 str. 12009, complete genomeouter membrane protein X1e-49195
NC_013353:604719:608184608184608783600Escherichia coli O103:H2 str. 12009, complete genomeouter membrane precursor Lom2e-1375.5
NC_013353:2134556:214717221471722147771600Escherichia coli O103:H2 str. 12009, complete genomeouter membrane precursor Lom4e-1270.9
NC_013353:3627355:363308936330893633499411Escherichia coli O103:H2 str. 12009, complete genomePagC-like membrane protein1e-1479.3
NC_013353:867869:872034872034872633600Escherichia coli O103:H2 str. 12009, complete genomeouter membrane precursor Lom4e-1270.9
NC_013353:1472506:148661214866121487211600Escherichia coli O103:H2 str. 12009, complete genomeouter membrane precursor Lom4e-1270.9
NC_013364:1477248:148171214817121482311600Escherichia coli O111:H- str. 11128, complete genomeputative outer membrane Lom2e-1272
NC_013364:928486:930528930528931043516Escherichia coli O111:H- str. 11128, complete genomeouter membrane protein X1e-49195
NC_013364:2522888:253916025391602539759600Escherichia coli O111:H- str. 11128, complete genomeputative outer membrane Lom4e-1374.3
NC_013364:3312379:331907633190763319675600Escherichia coli O111:H- str. 11128, complete genomeputative outer membrane Lom2e-1272
NC_013364:1997891:201367820136782014277600Escherichia coli O111:H- str. 11128, complete genomeputative outer membrane Lom3e-1374.3
NC_013364:863209:879795879795880394600Escherichia coli O111:H- str. 11128, complete genomeputative outer membrane Lom2e-1168.2
NC_011601:1077548:108204010820401082639600Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeouter membrane precursor Lom5e-1477
NC_011601:756885:765302765302765901600Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeouter membrane precursor Lom5e-1477
NC_011601:1466496:147003714700371470636600Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeouter membrane precursor Lom2e-1581.6
NC_011601:3338888:334448433444843345032549Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomePagC-like membrane protein3e-1994.4
NC_002655:2730659:274769727476972748296600Escherichia coli O157:H7 EDL933, complete genomeputative outer membrane protein of prophage CP-933U3e-1374.3
NC_002655:1909139:192539019253901925989600Escherichia coli O157:H7 EDL933, complete genomeputative outer membrane protein Lom precursor of prophage CP-933O2e-1271.6
NC_002655:3919545:392514139251413925674534Escherichia coli O157:H7 EDL933, complete genomeputative PagC-like membrane protein4e-1994.4
NC_002655:919654:923849923849924448600Escherichia coli O157:H7 EDL933, complete genomeputative outer membrane protein of prophage CP-933K4e-1580.5
NC_011353:1761977:177774317777431778342600Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeAil/Lom family protein9e-1166.2
NC_011353:3956630:396222639622263962759534Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeouter membrane invasion protein4e-1994.4
NC_011353:921500:925563925563926162600Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeAil/Lom family protein9e-1579.7
NC_011353:1195179:121177112117711212370600Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeAil/Lom family protein5e-1373.9
NC_011353:1716037:171977917197791720378600Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeAil/Lom family protein2e-1271.6
NC_011353:2563056:257995025799502580549600Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeAil/Lom family protein4e-1374.3
NC_011353:2892265:289391428939142894513600Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeAil/Lom family protein5e-1373.9
NC_002695:917509:922198922198922797600Escherichia coli O157:H7 str. Sakai, complete genomeputative outer membrane protein precursor9e-1579.7
NC_002695:2158314:216238921623892162988600Escherichia coli O157:H7 str. Sakai, complete genomeputative outer host membrane protein precursor3e-1374.3
NC_002695:1794635:179817917981791798778600Escherichia coli O157:H7 str. Sakai, complete genomeputative outer membrane protein precursor4e-1373.9
NC_002695:2655445:267233926723392672938600Escherichia coli O157:H7 str. Sakai, complete genomeputative outer membrane protein precursor3e-1374.3
NC_002695:2893951:289841628984162899015600Escherichia coli O157:H7 str. Sakai, complete genomeputative outer membrane protein Lom precursor4e-1374.3
NC_002695:3852233:385782938578293858377549Escherichia coli O157:H7 str. Sakai, complete genomeputative virulence-related membrane protein4e-1994
NC_013008:3911356:391695239169523917500549Escherichia coli O157:H7 str. TW14359 chromosome, complete genomePagC-like membrane protein4e-1994
NC_013008:2561586:257893025789302579529600Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeAil/Lom family protein4e-1374.3
NC_013008:2889743:289420828942082894807600Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeouter membrane protein Lom5e-1373.9
NC_013008:1761165:177671917767191777318600Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeouter membrane protein Lom2e-1168.2
NC_013008:918215:927156927156927755600Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeouter membrane protein of prophage CP-933K9e-1579.7
NC_013008:1715831:171875417187541719353600Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLom-like outer membrane protein of cryptic prophage CP-933P2e-1271.6
NC_013361:1896446:191290019129001913499600Escherichia coli O26:H11 str. 11368 chromosome, complete genomeouter membrane precursor Lom3e-1271.2
NC_013361:649518:653695653695654294600Escherichia coli O26:H11 str. 11368 chromosome, complete genomeouter membrane precursor Lom6e-1373.6
NC_013361:3597812:361602636160263616664639Escherichia coli O26:H11 str. 11368 chromosome, complete genomeouter membrane precursor Lom1e-1375.9
NC_013941:3676146:368174236817423682383642Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-1994.4
NC_013941:338121:342337342337342936600Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeenterobacterial Ail/Lom family protein9e-1579.7
NC_013941:2425233:244198724419872442586600Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeenterobacterial Ail/Lom family protein7e-1373.2
NC_013941:1963523:196857919685791969178600Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeenterobacterial Ail/Lom family protein7e-1373.2
NC_013941:733286:736769736769737368600Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-1271.2
NC_013941:1014386:101922710192271019826600Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeenterobacterial Ail/Lom family protein7e-1373.2
NC_011742:585908:601253601253601852600Escherichia coli S88 chromosome, complete genomeLom-like outer membrane protein of prophage6e-1580.1
NC_011415:644811:648379648379648978600Escherichia coli SE11 chromosome, complete genomeputative phage outer membrane protein6e-1373.6
NC_011751:1377457:139273713927371393336600Escherichia coli UMN026 chromosome, complete genomeputative Lom-like outer membrane protein of phage origin7e-1580.1
NC_009648:293052:305359305359305979621Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative outer membrane protein8e-1786.3
NC_013421:3117639:313469131346913135206516Pectobacterium wasabiae WPP163, complete genomevirulence-related outer membrane protein6e-74276
NC_017047:1434500:145350314535031454036534Rahnella aquatilis HX2 chromosome, complete genomeouter membrane protein X3e-50197
NC_015061:1481500:150056015005601501093534Rahnella sp. Y9602 chromosome, complete genomevirulence-related outer membrane protein3e-50197
NC_015761:1181186:121060712106071211164558Salmonella bongori NCTC 12419, complete genomeouter membrane invasion protein1e-1995.5
NC_010067:1655815:166550816655081666065558Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-1995.9
NC_011149:361765:373185373185373709525Salmonella enterica subsp. enterica serovar Agona str. SL483,attachment invasion locus protein1e-1995.5
NC_011149:1870931:188065618806561881213558Salmonella enterica subsp. enterica serovar Agona str. SL483,virulence membrane protein PagC5e-2097.1
NC_006905:1342474:136388513638851364442558Salmonella enterica subsp. enterica serovar Choleraesuis strPhoP regulated: reduced macrophage survival2e-1995.1
NC_011205:2024458:203417020341702034727558Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853virulence membrane protein PagC2e-1995.1
NC_011294:1896168:190587919058791906436558Salmonella enterica subsp. enterica serovar Enteritidis strouter membrane invasion protein PagC2e-1995.1
NC_011274:1928939:193865019386501939207558Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91outer membrane invasion protein PagC2e-1995.1
NC_011274:376970:388376388376388900525Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein8e-2096.3
NC_016831:2627515:263366326336632634187525Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative outer membrane protein8e-2096.3
NC_016831:1083871:109527510952751095832558Salmonella enterica subsp. enterica serovar Gallinarum/pullorumouter membrane invasion protein (PagC)2e-1995.1
NC_011083:1323827:133729313372931337850558Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,virulence membrane protein PagC2e-1995.1
NC_011083:3171171:317575931757593176295537Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,outer membrane protein3e-0754.7
NC_011083:403022:437515437515438039525Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,attachment invasion locus protein8e-2096.3
NC_011080:1321268:133404213340421334599558Salmonella enterica subsp. enterica serovar Newport str. SL254,virulence membrane protein PagC2e-1995.1
NC_011080:383441:394848394848395372525Salmonella enterica subsp. enterica serovar Newport str. SL254,attachment invasion locus protein1e-1995.5
NC_011147:2463299:246937924693792469903525Salmonella enterica subsp. enterica serovar Paratyphi A strouter membrane protein1e-1995.5
NC_011147:1650142:165902616590261659583558Salmonella enterica subsp. enterica serovar Paratyphi A strouter membrane invasion protein2e-1995.1
NC_006511:1654959:166384316638431664400558Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCouter membrane invasion protein2e-1995.1
NC_006511:2467763:247384324738432474367525Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpossible outer membrane protein1e-1995.5
NC_010102:1779707:178941817894181789975558Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1995.1
NC_010102:2721374:272752227275222728046525Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-1995.5
NC_012125:2531817:254152925415292542086558Salmonella enterica subsp. enterica serovar Paratyphi C strainouter membrane invasion protein2e-1995.1
NC_011094:1282385:129890312989031299460558Salmonella enterica subsp. enterica serovar Schwarzengrund strouter membrane invasion protein5e-2097.1
NC_003198:378844:390264390264390788525Salmonella enterica subsp. enterica serovar Typhi str. CT18,possible outer membrane protein8e-2096.3
NC_003198:3042000:305004530500453050581537Salmonella enterica subsp. enterica serovar Typhi str. CT18,outer membrane protein (associated with virulence)3e-0754.7
NC_003198:1771432:178117717811771781734558Salmonella enterica subsp. enterica serovar Typhi str. CT18,outer membrane invasion protein2e-1995.5
NC_016832:3020000:302459230245923025128537Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Outer membrane protein (Associated with virulence)3e-0754.7
NC_016832:1182496:119837011983701198927558Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Virulence membrane protein pagC2e-1995.5
NC_016832:2581145:258722625872262587750525Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,outer membrane protein8e-2096.3
NC_004631:3030580:303595230359523036488537Salmonella enterica subsp. enterica serovar Typhi Ty2, completeouter membrane protein3e-0754.7
NC_004631:2584244:259032525903252590849525Salmonella enterica subsp. enterica serovar Typhi Ty2, completepossible outer membrane protein8e-2096.3
NC_004631:1182883:119939811993981199955558Salmonella enterica subsp. enterica serovar Typhi Ty2, completeouter membrane invasion protein2e-1995.5
NC_016860:1317174:132993813299381330495558Salmonella enterica subsp. enterica serovar Typhimurium strouter membrane invasion protein2e-1995.1
NC_016810:1276340:128919112891911289661471Salmonella enterica subsp. enterica serovar Typhimurium strouter membrane invasion protein (PagC)7e-1993.2
NC_016856:1326503:134222613422261342783558Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Svirulence membrane protein PAGC precursor2e-1995.1
NC_017046:1277787:128917712891771289734558Salmonella enterica subsp. enterica serovar Typhimurium str. 798outer membrane invasion protein (PagC)2e-1995.1
NC_016857:1276340:128910412891041289661558Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74virulence membrane protein PagC2e-1995.1
NC_016863:1277652:129041612904161290973558Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1virulence membrane protein PAGC precursor2e-1995.1
NC_003197:1320861:133225113322511332808558Salmonella typhimurium LT2, complete genomevirulence membrane protein PAGC precursor2e-1995.1
NC_015566:4662171:466624646662464666821576Serratia sp. AS12 chromosome, complete genomevirulence-related outer membrane protein1e-24112
NC_015566:4662171:467064046706404671215576Serratia sp. AS12 chromosome, complete genomevirulence-related outer membrane protein2e-24111
NC_007613:1038000:104148810414881042087600Shigella boydii Sb227, complete genomeputative membrane protein precursor3e-1477.8
NC_014228:3591758:359665935966593597237579Xenorhabdus nematophila ATCC 19061, complete genomeVirulence membrane protein pagC precursor4e-1994
NC_017168:3535786:355119335511933551744552Yersinia pestis A1122 chromosome, complete genomeattachment invasion locus protein1e-1789
NC_017168:2941938:294530229453022945826525Yersinia pestis A1122 chromosome, complete genomeouter membrane protein X7e-45179
NC_017168:3290380:329464432946443295183540Yersinia pestis A1122 chromosome, complete genomeattachment invasion locus protein7e-23106
NC_010159:1818500:183064818306481831172525Yersinia pestis Angola, complete genomeouter membrane protein X7e-45179
NC_010159:2128157:213631321363132136864552Yersinia pestis Angola, complete genomeAil/Lom family protein1e-1789
NC_008150:1705152:173918017391801739719540Yersinia pestis Antiqua, complete genomeattachment invasion locus protein precursor7e-23106
NC_008150:1384102:139234813923481392899552Yersinia pestis Antiqua, complete genomeattachment invasion locus protein1e-1789
NC_017265:1571305:157611715761171576641525Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative outer membrane protein7e-45179
NC_017265:1765399:178235417823541782893540Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,attachment invasion locus protein7e-23106
NC_005810:1663672:167948116794811680032552Yersinia pestis biovar Microtus str. 91001, complete genomeattachment invasion locus protein1e-1789
NC_005810:2549680:258266425826642583194531Yersinia pestis biovar Microtus str. 91001, complete genomeouter membrane protein X7e-45179
NC_003143:2804500:281661028166102817134525Yersinia pestis CO92, complete genomeouter membrane protein X7e-45179
NC_003143:2101902:210926921092692109820552Yersinia pestis CO92, complete genomeattachment invasion locus protein1e-1789
NC_017154:2100587:210881121088112109362552Yersinia pestis D106004 chromosome, complete genomeattachment invasion locus protein1e-1789
NC_017154:2804000:281608328160832816607525Yersinia pestis D106004 chromosome, complete genomeouter membrane protein X7e-45179
NC_017160:2414000:242925024292502429801552Yersinia pestis D182038 chromosome, complete genomeattachment invasion locus protein1e-1789
NC_017160:2787637:279244827924482792972525Yersinia pestis D182038 chromosome, complete genomeouter membrane protein X7e-45179
NC_017160:2054289:207333920733392073878540Yersinia pestis D182038 chromosome, complete genomeattachment invasion locus protein7e-23106
NC_004088:2691565:270700827070082707559552Yersinia pestis KIM, complete genomeouter membrane protein1e-1789
NC_004088:2227278:224345322434532243992540Yersinia pestis KIM, complete genomeouter membrane protein X7e-23106
NC_004088:1851500:185503018550301855560531Yersinia pestis KIM, complete genomeouter membrane protein X7e-45179
NC_008149:1842500:187584118758411876380540Yersinia pestis Nepal516, complete genomeattachment invasion locus protein precursor7e-23106
NC_008149:2366500:237839423783942378918525Yersinia pestis Nepal516, complete genomeouter membrane protein7e-45179
NC_009381:2138625:216881821688182169342525Yersinia pestis Pestoides F chromosome, complete genomeouter membrane protein X7e-45179
NC_009381:1414985:142636514263651426916552Yersinia pestis Pestoides F chromosome, complete genomeattachment invasion locus protein1e-1789
NC_009381:1064227:106911310691131069652540Yersinia pestis Pestoides F chromosome, complete genomeattachment invasion locus protein7e-23106
NC_014029:2388500:240024424002442400795552Yersinia pestis Z176003 chromosome, complete genomeattachment invasion locus protein1e-1789
NC_014029:2756500:276893327689332769457525Yersinia pestis Z176003 chromosome, complete genomeouter membrane protein X7e-45179
NC_014029:2138000:214574721457472146286540Yersinia pestis Z176003 chromosome, complete genomeattachment invasion locus protein7e-23106
NC_009708:1735903:174271817427181743242525Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeouter membrane protein X7e-45179
NC_009708:2245586:225114522511452251684540Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeAil/Lom family protein7e-23106
NC_006155:2084669:209089520908952091446552Yersinia pseudotuberculosis IP 32953, complete genomeattachment invasion locus protein3e-1891.3
NC_006155:2979500:300984830098483010372525Yersinia pseudotuberculosis IP 32953, complete genomeouter membrane protein X7e-45179
NC_010634:2894631:292779029277902928314525Yersinia pseudotuberculosis PB1/+, complete genomevirulence-related outer membrane protein7e-45179
NC_010465:2582080:259258225925822593133552Yersinia pseudotuberculosis YPIII, complete genomevirulence-related outer membrane protein3e-1890.9
NC_010465:2282874:228843322884332288972540Yersinia pseudotuberculosis YPIII, complete genomevirulence-related outer membrane protein7e-23106