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Query: NC_012207:3766978 Mycobacterium bovis BCG str. Tokyo 172, complete genome

Start: 3766978, End: 3792614, Length: 25637

Host Lineage: Mycobacterium bovis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Used for the production of BCG vaccine in Japan. Causative agent of classic bovine tuberculosis. This bacterium is the causative agent of classic bovine tuberculosis, but it can also cause the disease in humans, especially if contaminated milk is consumed without prior pasteurization. The Mycobacterium bovis complex is a diverse group of species, serovars and morphotypes that cause tuberculosis-like diseases in animals and humans. Pasteurization of milk is a major preventitive factor in transmission of bovine tuberculosis to humans. However, spreading the disease through milk and dairy products is still a concern in underdeveloped countries where pasteurization is not practiced. The pathology in cows is similar to the pathology of Mycobacterium tuberculosis in humans, with pulmonary TB leading to chronic debilitation, coughing, and further systemic spread to other organs. In addition, 1 to 2% of infected cows develop mycobacterial mastitis that results in shedding of the bacteria into the milk.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008782:2062962*2062962208700324042Acidovorax sp. JS42, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012725:976819768112016422484Burkholderia glumae BGR1 plasmid bglu_4p, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_002945:83102983102985365622628Mycobacterium bovis AF2122/97, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_002945:37351413735141376077425634Mycobacterium bovis AF2122/97, complete genome037100BLASTN svgBLASTP svg
NC_008769:37690653769065379470125637Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome037120BLASTN svgBLASTP svg
NC_008769:86067086067087969619027Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_012207:83103083103085360922580Mycobacterium bovis BCG str. Tokyo 172, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_015848:38512303851230387671725488Mycobacterium canettii CIPT 140010059, complete genome029870BLASTN svgBLASTP svg
NC_019950:38180003818000384014722148Mycobacterium canettii CIPT 140060008 complete genome026160BLASTN svgBLASTP svg
NC_002677:49104349104351327322231Mycobacterium leprae TN, complete genome9e-22113BLASTN svgBLASTP svg
NC_020133:48419324841932485992417993Mycobacterium liflandii 128FXT, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_020133:14439341443934146609922166Mycobacterium liflandii 128FXT, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_009077:1027357*1027357106455537199Mycobacterium sp. JLS, complete genome1e-61246BLASTN svgBLASTP svg
NC_002755:83139783139785005418658Mycobacterium tuberculosis CDC1551, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_002755:37737343773734379844824715Mycobacterium tuberculosis CDC1551, complete genome036940BLASTN svgBLASTP svg
NC_009565:37939763793976381869024715Mycobacterium tuberculosis F11, complete genome036980BLASTN svgBLASTP svg
NC_009565:83307683307685178218707Mycobacterium tuberculosis F11, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_009525:39335673933567395892925363Mycobacterium tuberculosis H37Ra, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009525:83051383051384921918707Mycobacterium tuberculosis H37Ra, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_009525:37940003794000381625122252Mycobacterium tuberculosis H37Ra, complete genome020090BLASTN svgBLASTP svg
NC_000962:37815013781501380757326073Mycobacterium tuberculosis H37Rv, complete genome025740BLASTN svgBLASTP svg
NC_019673:67784016778401680115922759Saccharothrix espanaensis DSM 44229 complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014168:709036*70903673493125896Segniliparus rotundus DSM 44985 chromosome, complete genome1e-39172BLASTN svgBLASTP svg
NC_013947:3785332*3785332384029254961Stackebrandtia nassauensis DSM 44728 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg