Pre_GI: BLASTP Hits

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Query: NC_011989:1638261:1660676 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 1660676, End: 1661125, Length: 450

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014532:3479674:350013835001383500509372Halomonas elongata DSM 2581, complete genomediacylglycerol kinase1e-0962
NC_013446:2820000:284401628440162844417402Comamonas testosteroni CNB-2, complete genomediacylglycerol kinase1e-0755.5
NC_010658:4257310:425731042573104257678369Shigella boydii CDC 3083-94, complete genomediacylglycerol kinase4e-0753.9
NC_015733:1398083:141995514199551420320366Pseudomonas putida S16 chromosome, complete genomediacylglycerol kinase1e-0651.6
NC_008786:1936626:193956419395641940010447Verminephrobacter eiseniae EF01-2, complete genomediacylglycerol kinase2e-0651.6
NC_010002:1879220:191860519186051919018414Delftia acidovorans SPH-1, complete genomediacylglycerol kinase2e-0651.6
NC_010506:2441944:244701724470172447388372Shewanella woodyi ATCC 51908, complete genomediacylglycerol kinase2e-0651.2
NC_016147:623666:642134642134642496363Pseudoxanthomonas spadix BD-a59 chromosome, complete genomediacylglycerol kinase3e-0650.8