Pre_GI: BLASTP Hits

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Query: NC_011982:130199:142940 Agrobacterium vitis S4 plasmid pTiS4, complete sequence

Start: 142940, End: 143977, Length: 1038

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012988:2455807:249854124985412499539999Methylobacterium extorquens DM4, complete genomereplication protein B6e-44178
NC_011894:3820000:3837564383756438385741011Methylobacterium nodulans ORS 2060, complete genomeplasmid partitioning protein RepB8e-39161
NC_015318:981989:990537990537991346810Hippea maritima DSM 10411 chromosome, complete genomeparB-like partition protein3e-0653.1
NC_014251:243700:244951244951245709759Streptococcus pneumoniae TCH8431/19A chromosome, complete genomeParB family partitioning protein4e-0652.8
NC_015564:4727630:4732819473281947338591041Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genomeputative chromosome partitioning protein ParB9e-0651.6