Pre_GI: BLASTP Hits

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Query: NC_011745:291422:310012 Escherichia coli ED1a chromosome, complete genome

Start: 310012, End: 310845, Length: 834

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated in the 2000s from the faeces of a healthy man in France. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008800:4389687:438968743896874390520834Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein6e-128456
NC_017154:3094000:311353131135313114385855Yersinia pestis D106004 chromosome, complete genomehypothetical protein7e-94343
NC_003143:2895617:289561728956172896471855Yersinia pestis CO92, complete genomehypothetical protein7e-94343
NC_004088:1291754:129175412917541292608855Yersinia pestis KIM, complete genomehypothetical protein7e-94343
NC_008149:1221637:122163712216371222491855Yersinia pestis Nepal516, complete genomehypothetical protein7e-94343
NC_012724:2443500:244352924435292444449921Burkholderia glumae BGR1 chromosome 1, complete genomeTranscriptional regulator, RpiR family protein1e-45183
NC_008358:2257787:227156122715612272391831Hyphomonas neptunium ATCC 15444, complete genomeSIS domain protein9e-41167
NC_008254:3980327:399500239950023995925924Mesorhizobium sp. BNC1, complete genometranscriptional regulator, RpiR family7e-35147
NC_011985:61003:972699726998153885Agrobacterium radiobacter K84 chromosome 1, complete genometranscriptional regulator protein9e-34144
NC_014640:6745873:679667267966726797544873Achromobacter xylosoxidans A8 chromosome, complete genomeRpiR family transcriptional regulator6e-30131
NC_014323:3976351:403028740302874031168882Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein6e-28124
NC_016630:1385719:139135113913511392217867Filifactor alocis ATCC 35896 chromosome, complete genometranscriptional regulator2e-25116
NC_009079:1492664:151177715117771512637861Burkholderia mallei NCTC 10247 chromosome I, complete sequencephosphosugar-binding transcriptional regulator, RpiR family1e-24113
NC_014657:1193985:119567511956751196538864Caldicellulosiruptor owensensis OL chromosome, complete genometranscriptional regulator, rpir family2e-24112
NC_010505:5035668:504276550427655043655891Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, RpiR family3e-24112
NC_019973:5869500:588133358813335882238906Mesorhizobium australicum WSM2073, complete genometranscriptional regulator2e-22106
NC_014923:5940500:595237359523735953278906Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completesugar isomerase (SIS)2e-22106
NC_015675:6493444:650704465070446507949906Mesorhizobium opportunistum WSM2075 chromosome, complete genomeRpiR family transcriptional regulator2e-22106
NC_015376:2241000:224701822470182247878861Burkholderia gladioli BSR3 chromosome chromosome 2, completetranscriptional regulator, RpiR family4e-22105
NC_015389:616430:639327639327640196870Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, RpiR family4e-2098.6
NC_011958:1031592:106964510696451070505861Rhodobacter sphaeroides KD131 chromosome 2, complete genomeTranscriptional regulator, RpiR family2e-1996.3
NC_014323:3976351:402026640202664021225960Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein4e-1995.5
NC_017270:1755552:176398117639811764817837Vibrio cholerae LMA3984-4 chromosome chromosome I, completeSialic acid utilization regulator, RpiR family3e-1272.4
NC_013124:2063460:206463220646322065471840Acidimicrobium ferrooxidans DSM 10331, complete genometranscriptional regulator, RpiR family1e-1170.9
NC_012668:1688500:172144717214471722277831Vibrio cholerae MJ-1236 chromosome 1, complete sequencesialic acid utilization regulator RpiR family1e-1170.9
NC_009457:1444449:147833414783341479170837Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein1e-1170.9
NC_012578:1838470:187236418723641873200837Vibrio cholerae M66-2 chromosome I, complete sequencePutative HTH-type transcriptional regulator ybbH1e-1170.9
NC_016445:1363831:139663113966311397446816Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completesialic acid utilization regulator RpiR family9e-1270.9
NC_020063:2449554:247206824720682472898831Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator2e-1170.1
NC_008358:2574343:257961025796102580443834Hyphomonas neptunium ATCC 15444, complete genometranscriptional regulator, RpiR family1e-1067.4
NC_005139:2201820:227140422714042272330927Vibrio vulnificus YJ016 chromosome I, complete sequencetranscriptional regulator1e-1067
NC_014219:192555:206560206560207414855Bacillus selenitireducens MLS10 chromosome, complete genometranscriptional regulator, RpiR family2e-1066.6
NC_004129:2440744:245737724573772458264888Pseudomonas fluorescens Pf-5, complete genomeSIS domain protein3e-1065.9
NC_003909:927955:935762935762936625864Bacillus cereus ATCC 10987, complete genometranscriptional regulator, RpiR family, putative4e-1065.5
NC_015634:2933712:295589529558952956770876Bacillus coagulans 2-6 chromosome, complete genomeRpiR family transcriptional regulator2e-0963.2
NC_004193:375416:641553641553642401849Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator3e-0962.4
NC_016602:2292518:231509123150912315954864Vibrio furnissii NCTC 11218 chromosome 1, complete sequencetranscriptional regulator4e-0962
NC_009485:1222697:123782312378231238635813Bradyrhizobium sp. BTAi1 chromosome, complete genomeRpiR family transcriptional regulator6e-0961.6
NC_003197:1207597:121527512152751216156882Salmonella typhimurium LT2, complete genomeputative transcriptional regulator6e-0961.6
NC_011094:1166271:117395011739501174831882Salmonella enterica subsp. enterica serovar Schwarzengrund strtranscriptional regulator, RpiR family protein6e-0961.6
NC_016810:1163919:117159811715981172479882Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator6e-0961.6
NC_016856:1165941:117362011736201174501882Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transcriptional regulator6e-0961.6
NC_016860:1205282:121296112129611213842882Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator6e-0961.6
NC_016863:1165232:117291111729111173792882Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator6e-0961.6
NC_011080:1209935:121761412176141218495882Salmonella enterica subsp. enterica serovar Newport str. SL254,transcriptional regulator, RpiR family7e-0961.2
NC_003198:1117687:112536611253661126247882Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative transcriptional regulator7e-0961.2
NC_010102:1979742:199189419918941992775882Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-0961.2
NC_011083:1216500:122000412200041220885882Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transcriptional regulator, RpiR family7e-0961.2
NC_017046:1164176:117185511718551172679825Salmonella enterica subsp. enterica serovar Typhimurium str. 798transcriptional regulator7e-0961.2
NC_016857:1163919:117159811715981172512915Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transcriptional regulator8e-0961.2
NC_006905:1186895:119457411945741195455882Salmonella enterica subsp. enterica serovar Choleraesuis strputative transcriptional regulator7e-0961.2
NC_004631:1842050:185456618545661855447882Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative transcriptional regulator7e-0961.2
NC_011205:1186097:119377511937751194656882Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853RpiR family transcriptional regulator7e-0961.2
NC_011274:1094379:110205811020581102939882Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transcriptional regulator7e-0961.2
NC_011294:1085447:109314410931441094025882Salmonella enterica subsp. enterica serovar Enteritidis strtranscriptional regulator7e-0961.2
NC_012125:2646792:265912026591202660001882Salmonella enterica subsp. enterica serovar Paratyphi C straintranscriptional regulator7e-0961.2
NC_016831:1905289:192213519221351923016882Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative transcriptional regulator7e-0961.2
NC_016832:1838220:185141618514161852297882Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,RpiR-family transcriptional regulator7e-0961.2
NC_013421:2306000:230610423061042307030927Pectobacterium wasabiae WPP163, complete genometranscriptional regulator, RpiR family7e-0961.2
NC_021066:601029:611221611221612078858Raoultella ornithinolytica B6, complete genomeDNA-binding transcriptional repressor RpiR1e-0860.8
NC_007651:1726472:1749745174974517516701926Burkholderia thailandensis E264 chromosome I, complete sequenceglucokinase/transcriptional regulator, RpiR family, fusion1e-0860.5
NC_008314:1202963:120453312045331205366834Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator1e-0860.5
NC_013171:1677543:168050016805001681339840Anaerococcus prevotii DSM 20548, complete genometranscriptional regulator, RpiR family2e-0860.1
NC_016822:1339058:135362613536261354495870Shigella sonnei 53G, complete genomeDNA-binding transcriptional regulator HexR2e-0859.7
CU928160:1978500:198239319823931983262870Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator2e-0859.7
NC_011741:1978500:198239319823931983262870Escherichia coli IAI1 chromosome, complete genomeDNA-binding transcriptional regulator HexR2e-0859.7
NC_013361:2591829:259568825956882596557870Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA-binding transcriptional regulator HexR2e-0859.7
NC_013364:2355298:235915723591572360026870Escherichia coli O111:H- str. 11128, complete genomeputative DNA-binding transcriptional regulator2e-0859.7
NC_012691:2146473:215826621582662159144879Tolumonas auensis DSM 9187, complete genometranscriptional regulator, RpiR family2e-0859.7
NC_015224:3892972:390341039034103904270861Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,transcriptional regulator3e-0859.3
NC_020209:397376:451535451535452386852Pseudomonas poae RE*1-1-14, complete genomehypothetical protein3e-0859.3
NC_006511:1770000:178216817821681783049882Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative transcriptional regulator3e-0859.3
NC_011147:1763681:177735117773511778232882Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional regulator3e-0859.3
NC_014039:1238500:124142412414241242296873Propionibacterium acnes SK137 chromosome, complete genometranscriptional regulator, RpiR family3e-0858.9
NC_007510:973828:9935829935829955101929Burkholderia sp. 383 chromosome 1, complete sequenceGlucokinase3e-0858.9
NC_009708:1497898:151619215161921517070879Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeRpiR family transcriptional regulator4e-0858.9
NC_006085:1234587:123938512393851240257873Propionibacterium acnes KPA171202, complete genomeputative transcriptional regulator4e-0858.9
NC_015389:114469:120227120227121075849Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, RpiR family5e-0858.5
NC_006905:3717306:372665337266533727534882Salmonella enterica subsp. enterica serovar Choleraesuis strProtein rpiR4e-0858.5
NC_014410:2329838:234588623458862346728843Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,transcriptional regulator, RpiR family6e-0858.2
NC_007384:1355060:137077813707781371647870Shigella sonnei Ss046, complete genomehypothetical protein7e-0858.2
NC_016516:1203000:120589412058941206766873Propionibacterium acnes TypeIA2 P.acn33 chromosome, completetranscriptional regulator9e-0857.8
NC_008800:4013298:402615540261554027015861Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,transcriptional regulator8e-0857.8
NC_016511:1212282:121507712150771215949873Propionibacterium acnes TypeIA2 P.acn31 chromosome, completetranscriptional regulator8e-0857.8
NC_010658:1933605:193746419374641938333870Shigella boydii CDC 3083-94, complete genometranscriptional regulator, rpiR family7e-0857.8
NC_016512:1211653:121444812144481215320873Propionibacterium acnes TypeIA2 P.acn17 chromosome, completetranscriptional regulator9e-0857.4
NC_010067:1782998:179623817962381797119882Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-0757
NC_006582:2205154:220515422051542205891738Bacillus clausii KSM-K16, complete genometranscriptional regulator2e-0756.2
NC_007511:1094050:111669911166991117577879Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, RpiR family3e-0755.8
NC_016901:2542110:254373725437372544591855Shewanella baltica OS678 chromosome, complete genomeRpiR family transcriptional regulator6e-0755.1
NC_007929:1463295:149820914982091499045837Lactobacillus salivarius subsp. salivarius UCC118, complete genomeTranscriptional regulator, RpiR family5e-0755.1
NC_011661:1807101:181101118110111811856846Dictyoglomus turgidum DSM 6724, complete genometranscriptional regulator, RpiR family1e-0653.9
NC_007645:713930:730736730736731593858Hahella chejuensis KCTC 2396, complete genomeTranscriptional regulator3e-0652.8
NC_011741:2715246:272234927223492723197849Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator3e-0652.8
CU928160:2715246:272234927223492723197849Escherichia coli IAI1 chromosome, complete genomefused putative DNA-binding transcriptional regulator; putative isomerase3e-0652.8
NC_010999:2450974:245456624545662455396831Lactobacillus casei, complete genomeTranscriptional regulator3e-0652.8
NC_012914:336750:343488343488344321834Paenibacillus sp. JDR-2, complete genometranscriptional regulator, RpiR family4e-0652.4
NC_020418:1397112:141023714102371411124888Morganella morganii subsp. morganii KT, complete genomeSialic acid utilization regulator, RpiR family3e-0652.4
NC_015508:251354:251354251354252250897Agrobacterium sp. H13-3 chromosome linear, complete sequenceiron transport system regulatory protein FitR5e-0652
NC_014039:1766049:177515917751591776049891Propionibacterium acnes SK137 chromosome, complete genometranscriptional regulator, RpiR family6e-0651.6
NC_014841:131308:131308131308132201894Pantoea sp. At-9b plasmid pPAT9B04, complete sequencetranscriptional regulator, RpiR family6e-0651.6
NC_008752:2056547:207339120733912074260870Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, RpiR family7e-0651.2
NC_015389:175406:182891182891183802912Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, RpiR family9e-0651.2