Pre_GI: BLASTP Hits

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Query: NC_011149:4474012:4485108 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 4485108, End: 4486025, Length: 918

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:4486433:449755444975544498540987Salmonella enterica subsp. enterica serovar Choleraesuis strputative periplasmic protein1e-175615
NC_012125:4481808:449299844929984493915918Salmonella enterica subsp. enterica serovar Paratyphi C strainperiplasmic protein6e-175613
NC_011083:4547825:4558804455880445598051002Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative periplasmic protein2e-174611
NC_010102:4477836:448918544891854490102918Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-170598