Pre_GI: BLASTP Hits

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Query: NC_011149:4474012:4484098 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 4484098, End: 4484304, Length: 207

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006511:4465495:447119944711994472053855Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC3e-24110
NC_016832:4649432:465566746556674655873207Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Transposase InsF for insertion sequence IS3A/B/C/D/E/fA3e-24110
NC_011083:4547825:455787945578794558085207Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,3e-24110
NC_012125:4481808:449188744918874492195309Salmonella enterica subsp. enterica serovar Paratyphi C strainTransposase insF for insertion sequence IS3A/B/C/D4e-24109
NC_006905:4486433:449651244965124496820309Salmonella enterica subsp. enterica serovar Choleraesuis strTransposase insF for insertion sequence IS3A/B/C/D4e-24109
NC_010102:4477836:448817644881764488382207Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-24108
NC_011294:346915:348718348718349128411Salmonella enterica subsp. enterica serovar Enteritidis str4e-2096.7
NC_011205:371001:372687372687373214528Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853transposase4e-2096.7
NC_011149:1110642:112259011225901123456867Salmonella enterica subsp. enterica serovar Agona str. SL483,ISEc16, orfB2e-1994.7
NC_016860:2917910:293454329345432935409867Salmonella enterica subsp. enterica serovar Typhimurium strIS3 transposase InsF3e-1994
NC_003197:2894344:291097729109772911843867Salmonella typhimurium LT2, complete genomeputative transposase3e-1994
NC_011083:2847318:288548328854832886349867Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transposase InsF for insertion sequence IS3A/B/C/D/E/fA3e-1994
NC_016856:2896630:293121229312122932078867Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transposase3e-1994
NC_016863:2844883:287946528794652880331867Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transposase3e-1994
NC_015761:2373967:238093723809372381320384Salmonella bongori NCTC 12419, complete genome3e-1994
NC_016831:1865681:187488518748851875376492Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-1994
NC_011205:1227373:123641812364181236957540Salmonella enterica subsp. enterica serovar Dublin str. CT_020218534e-1993.2
NC_020064:1409596:142179314217931422116324Serratia marcescens FGI94, complete genomehypothetical protein2e-1684.7
NC_011205:4718239:472660647266064727139534Salmonella enterica subsp. enterica serovar Dublin str. CT_020218534e-1683.2
NC_011294:4560902:456926945692694569802534Salmonella enterica subsp. enterica serovar Enteritidis strIS1230 transposase4e-1683.2
NC_016831:4517850:452641745264174526950534Salmonella enterica subsp. enterica serovar Gallinarum/pullorumIS1230 transposase4e-1683.2
NC_020064:3998715:406440140644014065255855Serratia marcescens FGI94, complete genometransposase6e-1682.8
NC_011740:2859933:286084028608402861706867Escherichia fergusonii ATCC 35469, complete genomeIS3 element protein InsF2e-1478.2
NC_012214:1650523:166907016690701669924855Erwinia pyrifoliae Ep1/96, complete genomeTransposase, orf B1e-1375.1
NC_012214:2221702:226107322610732261927855Erwinia pyrifoliae Ep1/96, complete genomeTransposase IS3/IS911, probale orf B1e-1375.1
NC_012214:1650523:165905116590511659905855Erwinia pyrifoliae Ep1/96, complete genomeTransposase IS3/IS911, orf B1e-1375.1
NC_012214:1355500:136944813694481370302855Erwinia pyrifoliae Ep1/96, complete genomeTransposase, probable orf A1e-1375.1
NC_012214:1355500:136747713674771368205729Erwinia pyrifoliae Ep1/96, complete genomeTransposase IS3/IS911, probable orf B1e-1375.1
NC_004337:3590323:381087238108723811264393Shigella flexneri 2a str. 301, complete genomehypothetical protein2e-1374.7
NC_004741:2741971:275188527518852752313429Shigella flexneri 2a str. 2457T, complete genomeIS3 orfB3e-1373.9
NC_013361:3651150:366508336650833665547465Escherichia coli O26:H11 str. 11368 chromosome, complete genome4e-1373.6
NC_010498:2278306:228095222809522281785834Escherichia coli SMS-3-5, complete genome5e-1373.2
NC_004431:1166568:117462811746281175380753Escherichia coli CFT073, complete genomeTransposase insF for insertion sequence IS3A/B/C/D/E/fA5e-1373.2
NC_008253:296500:303560303560304414855Escherichia coli 536, complete genometransposase5e-1373.2
NC_000913:558920:566361566361567227867Escherichia coli K12, complete genomeDLP12 prophage; IS3 element protein InsF7e-1372.8
NC_010468:4059436:406845740684574069323867Escherichia coli ATCC 8739, complete genomeIntegrase catalytic region7e-1372.8
CP002185:4035502:405304040530404053906867Escherichia coli W, complete genomeIS3 Transposase ORF27e-1372.8
NC_000913:303719:314811314811315677867Escherichia coli K12, complete genomeIS3 element protein InsF7e-1372.8
NC_010473:498252:505693505693506559867Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; IS3 element protein InsF7e-1372.8
AC_000091:303719:314811314811315677867Escherichia coli W3110 DNA, complete genomeIS3 element protein InsF7e-1372.8
AC_000091:558920:566361566361567227867Escherichia coli W3110 DNA, complete genomeIS3 element protein InsF7e-1372.8
AC_000091:1083798:109469710946971095563867Escherichia coli W3110 DNA, complete genomeIS3 element protein InsF7e-1372.8
NC_010473:279948:290361290361291227867Escherichia coli str. K-12 substr. DH10B, complete genomeIS3 element protein InsF7e-1372.8
NC_008258:1076922:108889210888921089758867Shigella flexneri 5 str. 8401, complete genomeIS3 ORF27e-1372.8
CP002516:44744:521675216753033867Escherichia coli KO11, complete genomeIntegrase catalytic region7e-1372.8
NC_000913:1087062:109349810934981094364867Escherichia coli K12, complete genomeIS3 element protein InsF7e-1372.8
CU928159:30700:341503415035016867Escherichia coli str. 55989 plasmid 55989p, complete genometransposase ORF B, IS37e-1372.8
CP002516:1165726:117256111725611173427867Escherichia coli KO11, complete genomeIntegrase catalytic region7e-1372.8
NC_010468:2809125:281459028145902815456867Escherichia coli ATCC 8739, complete genomeIntegrase catalytic region7e-1372.8
NC_004337:2747917:275725327572532758119867Shigella flexneri 2a str. 301, complete genomeIS3 ORF27e-1372.8
NC_013716:5201097:523569452356945236560867Citrobacter rodentium ICC168, complete genomeIS3 transposase B7e-1372.8
NC_017328:1075535:109566610956661096532867Shigella flexneri 2002017 chromosome, complete genomeIS3, transposase orfB6e-1372.8
NC_017328:3088907:314054631405463141412867Shigella flexneri 2002017 chromosome, complete genomeIS3 orfB7e-1372.8
NC_004337:3049118:310217931021793103045867Shigella flexneri 2a str. 301, complete genomeIS3 ORF27e-1372.8
NC_004741:3041294:309166830916683092534867Shigella flexneri 2a str. 2457T, complete genomeIS3 orfB7e-1372.8
NC_008258:2905413:291114829111482912014867Shigella flexneri 5 str. 8401, complete genomeIS3 ORF27e-1372.8
NC_017328:2785309:279613527961352797001867Shigella flexneri 2002017 chromosome, complete genomeIS3 ORF27e-1372.8
NC_016902:44744:521675216753033867Escherichia coli KO11FL chromosome, complete genomeintegrase catalytic subunit7e-1372.8
NC_016902:1165726:117256111725611173427867Escherichia coli KO11FL chromosome, complete genomeintegrase catalytic subunit7e-1372.8
NC_012967:1593101:160827816082781609144867Escherichia coli B str. REL606 chromosome, complete genomeputative transposase for IS37e-1372.8
NC_004337:1065609:106951210695121070378867Shigella flexneri 2a str. 301, complete genomeIS3 ORF27e-1372.8
CP002185:2919752:293243029324302933296867Escherichia coli W, complete genomeIS3 Transposase ORF27e-1372.8
NC_009801:3013838:302677030267703027636867Escherichia coli E24377A, complete genomeIS3, transposase orfB7e-1372.8
NC_011083:4547825:458547045854704586336867Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,ISEc16, orfB7e-1372.8
NC_012759:461680:469121469121469987867Escherichia coli BW2952 chromosome, complete genomeIS3 element protein InsF7e-1372.8
NC_012947:2189533:219422521942252195091867Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeIntegrase catalytic region7e-1372.8
NC_013364:3701895:371893437189343719800867Escherichia coli O111:H- str. 11128, complete genomeputative IS3 transposase InsF8e-1372.4
NC_011415:3006794:302033130203313021197867Escherichia coli SE11 chromosome, complete genometransposase8e-1372.4
NC_013361:3287671:330811433081143308494381Escherichia coli O26:H11 str. 11368 chromosome, complete genome1e-1272
NC_011741:2091249:211327021132702114136867Escherichia coli IAI1 chromosome, complete genomeIS3 element protein InsF2e-1271.2
CU928160:2091249:211327021132702114136867Escherichia coli IAI1 chromosome, complete genomeIS3 element protein InsF2e-1271.2
NC_008789:1393526:140350114035011404007507Halorhodospira halophila SL1, complete genomeIS3 ORF23e-0650.8