Pre_GI: BLASTN Hits

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Query: NC_010793:30488 Orientia tsutsugamushi str. Ikeda, complete genome

Start: 30488, End: 50392, Length: 19905

Host Lineage: Orientia tsutsugamushi; Orientia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This organism is the causative agent of scrub typhus, and like other members of the Rickettsiales is an obligate intracellular organism. Scrub typhus, which occurs in rural and agricultural areas, is one of the most common infectious diseases in southeast Asia where an estimated 1 million cases occur each year. Many cases are mild, but if left untreated, a variety of serious illnesses can arise and fatality rates can range from 1-35%. Transmission occurs via an insect vector through the bite of the larval trombiculid mite (chiggers). The bacterium is transmitted transovarially in mites (from females to their offspring).




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012039:1399699*1399699142559925901Campylobacter lari RM2100, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014499:63365*633658752124157Candidatus Sulcia muelleri CARI chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_013123:59918*599188173721820Candidatus Sulcia muelleri SMDSEM, complete genome9e-0660BLASTN svgBLASTP svg
NC_010793:15089741508974153217323200Orientia tsutsugamushi str. Ikeda, complete genome01867BLASTN svgBLASTP svg
NC_010793:1075388*1075388110374328356Orientia tsutsugamushi str. Ikeda, complete genome1e-146527BLASTN svgBLASTP svg
NC_010793:41684941684944002323175Orientia tsutsugamushi str. Ikeda, complete genome01806BLASTN svgBLASTP svg
NC_010793:14688491468849148809919251Orientia tsutsugamushi str. Ikeda, complete genome9e-111408BLASTN svgBLASTP svg
NC_010793:81219*8121910439223174Orientia tsutsugamushi str. Ikeda, complete genome01540BLASTN svgBLASTP svg
NC_010793:72194472194474582723884Orientia tsutsugamushi str. Ikeda, complete genome01540BLASTN svgBLASTP svg
NC_010793:49650049650051508118582Orientia tsutsugamushi str. Ikeda, complete genome01540BLASTN svgBLASTP svg
NC_010793:1922000*1922000196058138582Orientia tsutsugamushi str. Ikeda, complete genome01540BLASTN svgBLASTP svg
NC_010793:54104054104057414833109Orientia tsutsugamushi str. Ikeda, complete genome9e-0660BLASTN svgBLASTP svg
NC_010793:17233651723365174939626032Orientia tsutsugamushi str. Ikeda, complete genome01540BLASTN svgBLASTP svg
NC_010793:1628500*1628500164809919600Orientia tsutsugamushi str. Ikeda, complete genome01162BLASTN svgBLASTP svg
NC_010793:12611112611114549019380Orientia tsutsugamushi str. Ikeda, complete genome03180BLASTN svgBLASTP svg
NC_010793:12878771287877130645418578Orientia tsutsugamushi str. Ikeda, complete genome01100BLASTN svgBLASTP svg
NC_010793:1811401*1811401187154360143Orientia tsutsugamushi str. Ikeda, complete genome02845BLASTN svgBLASTP svg
NC_010793:16957161695716171809922384Orientia tsutsugamushi str. Ikeda, complete genome0850BLASTN svgBLASTP svg
NC_010793:66850066850068609917600Orientia tsutsugamushi str. Ikeda, complete genome02797BLASTN svgBLASTP svg
NC_010793:11582791158279117659918321Orientia tsutsugamushi str. Ikeda, complete genome0777BLASTN svgBLASTP svg