Pre_GI: BLASTP Hits

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Query: NC_010723:1379256:1388238 Clostridium botulinum E3 str. Alaska E43, complete genome

Start: 1388238, End: 1389788, Length: 1551

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was probably isolated from salmon eggs associated with a foodborne case of botulism in Alaska, however the exact details are not available. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin.Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium. Honey is the most common vehicle for infection in infants. Food poisoning through C. botulinum is the most frequent type of infection caused by this bacterium. The wound botulism that occurs when C. botulinum infects an individual via an open wound is much rarer and is very similar to tetanus disease. There are several types of botulinum toxin known (type A through type F), all of them being neurotoxic polypeptides. The most common and widely distributed are strains and serovars of C. botulinum that produce type A toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010674:1390473:1397041139704113985851545Clostridium botulinum B str. Eklund 17B, complete genomeL-lactate permease0864
NC_009617:3360990:3368164336816433696271464Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeL-lactate transport0717
NC_009699:1122000:1130103113010311316261524Clostridium botulinum F str. Langeland chromosome, complete genomeL-lactate permease2e-99363
NC_012658:1052957:1069269106926910707921524Clostridium botulinum Ba4 str. 657 chromosome, complete genomeL-lactate permease3e-99362
NC_010520:1146000:1160234116023411617571524Clostridium botulinum A3 str. Loch Maree, complete genomeL-lactate permease3e-96352
NC_015214:1853106:1857751185775118592651515Lactobacillus acidophilus 30SC chromosome, complete genomeL-lactate permease6e-82305
NC_017068:2786391:2801359280135928028971539Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative L-lactate permease3e-79296
NC_015566:1206500:1225335122533512268911557Serratia sp. AS12 chromosome, complete genomeL-lactate transport3e-70266
NC_015567:1206727:1225520122552012270761557Serratia sp. AS9 chromosome, complete genomeL-lactate transport3e-70266
NC_016776:1878791:1895561189556118970601500Bacteroides fragilis 638R, complete genomeputative L-lactate permease5e-62239
NC_003228:1870953:1891138189113818926371500Bacteroides fragilis NCTC 9343, complete genomeputative L-lactate permease9e-62238
NC_008710:621822:6352986352986368331536Borrelia turicatae 91E135, complete genomeL-lactate permease2e-59230
NC_010501:734363:7673967673967690661671Pseudomonas putida W619, complete genomeL-lactate transport2e-51204
NC_008027:775896:7976527976527993221671Pseudomonas entomophila L48, complete genomeL-lactate permease3e-51203
NC_012660:5793200:5793200579320057948941695Pseudomonas fluorescens SBW25 chromosome, complete genomeglycolate permease1e-48194
NC_007492:857428:8856418856418873351695Pseudomonas fluorescens PfO-1, complete genomeL-lactate permease2e-47190
NC_004431:3513147:3534256353425635359381683Escherichia coli CFT073, complete genomeGlycolate permease glcA3e-45183
AP010958:3669500:3724066372406637257481683Escherichia coli O103:H2 str. 12009 DNA, complete genomeglycolate transporter4e-45182
NC_013353:3669500:3724066372406637257481683Escherichia coli O103:H2 str. 12009, complete genomeglycolate transporter4e-45182
NC_012759:3648500:3663748366374836654031656Escherichia coli BW2952 chromosome, complete genomeL-lactate permease2e-44180
NC_017317:944218:9593319593319609831653Corynebacterium ulcerans 809 chromosome, complete genomeL-lactate permease3e-44179
NC_015683:947048:9621629621629638141653Corynebacterium ulcerans BR-AD22 chromosome, complete genomeL-lactate permease3e-44179
NC_007606:3755155:3773192377319237748471656Shigella dysenteriae Sd197, complete genomeL-lactate permease4e-44179
NC_016932:832748:8681858681858698371653Corynebacterium pseudotuberculosis 316 chromosome, complete genomeL-lactate permease2e-43177
NC_004337:3590323:3749997374999737516521656Shigella flexneri 2a str. 301, complete genomeL-lactate permease2e-43177
NC_014329:844622:8800738800738817251653Corynebacterium pseudotuberculosis FRC41 chromosome, completeL-lactate permease2e-43177
NC_016781:844613:8800648800648817161653Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeL-lactate permease2e-43177
NC_017031:863093:8799148799148815661653Corynebacterium pseudotuberculosis P54B96 chromosome, completeL-lactate permease2e-43177
NC_017300:863898:8799698799698816211653Corynebacterium pseudotuberculosis 1002 chromosome, completeL-lactate permease2e-43177
NC_017301:863500:8796918796918813431653Corynebacterium pseudotuberculosis C231 chromosome, completeL-lactate permease2e-43177
NC_017303:863060:8798848798848815361653Corynebacterium pseudotuberculosis I19 chromosome, complete genomeL-lactate permease2e-43177
NC_012560:4350465:4367732436773243694171686Azotobacter vinelandii DJ, complete genomeL-lactate permease, Lldp7e-43175
NC_021150:4350461:4367728436772843694131686Azotobacter vinelandii CA6, complete genomeL-lactate permease, Lldp7e-43175
NC_017305:863072:8798968798968815481653Corynebacterium pseudotuberculosis PAT10 chromosome, completeL-lactate permease9e-43175
NC_010617:774914:8223208223208239181599Kocuria rhizophila DC2201, complete genomeputative L-lactate permease2e-41170
NC_013235:3913000:3916064391606439177641701Nakamurella multipartita DSM 44233, complete genomeL-lactate transport3e-40166
NC_008599:128431:1293281293281309231596Campylobacter fetus subsp. fetus 82-40, complete genomeglycolate permease GlcA5e-40166
NC_010505:2690939:2702858270285827045251668Methylobacterium radiotolerans JCM 2831, complete genomeL-lactate transport8e-39162
NC_016778:329288:3499103499103515471638Brucella canis HSK A52141 chromosome 1, complete sequenceL-lactate transporter9e-39161
NC_016795:1673464:1691584169158416932211638Brucella abortus A13334 chromosome 1, complete sequenceL-lactate transporter5e-38159
NC_016023:755237:7561647561647578371674Bacillus coagulans 36D1 chromosome, complete genomeL-lactate transport5e-38159
NC_017186:2252438:2252438225243822540481611Amycolatopsis mediterranei S699 chromosome, complete genomelactate transporter LctP family protein1e-34148
NC_014318:2252417:2252417225241722540271611Amycolatopsis mediterranei U32 chromosome, complete genomelactate transporter, LctP family1e-34148
NC_014643:535708:5527645527645544371674Rothia dentocariosa ATCC 17931 chromosome, complete genomeL-lactate transporter2e-32140
NC_016884:256598:2579122579122595161605Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeL-lactate permease2e-31137
NC_015757:263938:2652522652522668561605Sulfobacillus acidophilus TPY chromosome, complete genomeL-lactate transport2e-31137
NC_008268:3418000:3420238342023834219381701Rhodococcus sp. RHA1, complete genomeL-lactate permease5e-31135
NC_013209:2476039:2491579249157924931711593Acetobacter pasteurianus IFO 3283-01, complete genomeL-lactate permease2e-30134
NC_017100:2476822:2492786249278624943781593Acetobacter pasteurianus IFO 3283-03, complete genomeL-lactate permease2e-30134
NC_017108:2474583:2490123249012324917151593Acetobacter pasteurianus IFO 3283-12, complete genomeL-lactate permease2e-30134
NC_017111:2474601:2490141249014124917331593Acetobacter pasteurianus IFO 3283-32, complete genomeL-lactate permease2e-30134
NC_017121:2474588:2490128249012824917201593Acetobacter pasteurianus IFO 3283-07, complete genomeL-lactate permease2e-30134
NC_017125:2476802:2492766249276624943581593Acetobacter pasteurianus IFO 3283-22, complete genomeL-lactate permease2e-30134
NC_017146:2476844:2492808249280824944001593Acetobacter pasteurianus IFO 3283-26, complete genomeL-lactate permease2e-30134
NC_017150:2383361:2399325239932524009171593Acetobacter pasteurianus IFO 3283-01-42C, complete genomeL-lactate permease2e-30134
NC_017328:3088907:3145297314529731468831587Shigella flexneri 2002017 chromosome, complete genomeputative permease4e-30133
NC_004741:3041294:3096365309636530979511587Shigella flexneri 2a str. 2457T, complete genomeputative permease4e-30133
NC_004337:3049118:3107700310770031090971398Shigella flexneri 2a str. 301, complete genomeputative permease4e-26119
NC_004193:375416:3925683925683941571590Oceanobacillus iheyensis HTE831, complete genomeL-lactate permease2e-25117
NC_015930:1397524:1398668139866814002781611Lactococcus garvieae ATCC 49156, complete genomeL-lactate transporter protein2e-22107
NC_015145:3236445:3269253326925332709711719Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeL-lactate transport6e-22105
NC_006138:2341975:2366958236695823687181761Desulfotalea psychrophila LSv54, complete genomeL-lactate permease2e-21103
NC_015723:1486000:1515778151577815176041827Cupriavidus necator N-1 chromosome 2, complete sequenceglycolate permease GlcA1e-20101
NC_014532:3596097:3633859363385936348991041Halomonas elongata DSM 2581, complete genomeK03303 lactate transporter, LctP family2e-1687.4
NC_014210:397922:4001724001724020041833Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,L-lactate transport6e-1582.8
NC_003317:1263562:128163112816311282257627Brucella melitensis 16M chromosome I, complete sequenceL-LACTATE PERMEASE2e-1481.3
NC_019792:3446895:3488561348856134903301770Natronobacterium gregoryi SP2 chromosome, complete genomeL-lactate permease8e-1479
NC_013967:2103968:2108017210801721097111695Haloferax volcanii DS2 chromosome, complete genomeGlycolate permease glcA9e-1479
NC_015276:565701:5657015657015672751575Marinomonas mediterranea MMB-1 chromosome, complete genomeL-lactate transport5e-1066.2