Pre_GI: BLASTP Hits

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Query: NC_010610:795975:805003 Lactobacillus fermentum IFO 3956, complete genome

Start: 805003, End: 807726, Length: 2724

Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008054:745704:7546887546887574532766Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeCRISPR-associated helicase Cas30977
NC_014727:798191:8099868099868127512766Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,crispr-associated helicase cas30976
NC_008529:735233:7468327468327495972766Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeCRISPR-associated helicase0976
NC_008526:343445:3475193475193502872769Lactobacillus casei ATCC 334, complete genomeCRISPR-associated helicase0884
NC_015737:2146953:2151963215196321547312769Clostridium sp. SY8519, complete genomeputative helicase2e-174613
NC_015389:481282:4862164862164893563141Coriobacterium glomerans PW2 chromosome, complete genomeCRISPR-associated helicase Cas31e-122441
NC_013510:3117837:3128254312825431311512898Thermomonospora curvata DSM 43183, complete genomeCRISPR-associated helicase Cas33e-118427
NC_006361:4574536:4590706459070645934502745Nocardia farcinica IFM 10152, complete genomehypothetical protein5e-116419
NC_018720:1812000:1820832182083218239993168Bifidobacterium asteroides PRL2011 chromosome, complete genomeCRISPR-associated helicase Cas33e-113410
NC_007333:1743890:1844722184472218476342913Thermobifida fusca YX, complete genomeCRISPR-associated helicase Cas3, core4e-109396
NC_013131:4422000:4432703443270344373254623Catenulispora acidiphila DSM 44928, complete genomeCRISPR-associated protein, Cse1 family8e-108392
NC_019673:1988853:2042190204219020449372748Saccharothrix espanaensis DSM 44229 complete genomeCRISPR-associated helicase Cas36e-103375
NC_012590:977920:9836789836789864882811Corynebacterium aurimucosum ATCC 700975, complete genomeCRISPR-associated protein6e-97355
NC_007164:775000:7834007834007862522853Corynebacterium jeikeium K411, complete genomehypothetical protein7e-94345
NC_008278:514600:5190645190645218652802Frankia alni ACN14a, complete genomehypothetical protein; putative DEAD/DEAH box helicase domain3e-93343
NC_007775:723925:7396277396277423082682Synechococcus sp. JA-3-3Ab, complete genomeCRISPR-associated helicase Cas35e-86319
NC_013524:1150725:1150725115072511535352811Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeCRISPR-associated helicase Cas33e-85317
NC_013890:1175931:1184632118463211873102679Dehalococcoides sp. GT chromosome, complete genomeCRISPR-associated helicase Cas33e-80300
NC_007356:1165760:1208782120878212114752694Dehalococcoides sp. CBDB1, complete genomeputative CRISPR-associated helicase Cas34e-80300
NC_016109:603829:6205116205116233722862Kitasatospora setae KM-6054, complete genomeputative CRISPR-associated helicase6e-80299
NC_021150:1677811:1699786169978617024912706Azotobacter vinelandii CA6, complete genomeCRISPR-associated helicase Cas3, core7e-75282
NC_012560:1677798:1699773169977317024782706Azotobacter vinelandii DJ, complete genomeCRISPR-associated helicase Cas3, core7e-75282
NC_015387:942974:9498269498269526002775Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated helicase Cas34e-69263
NC_017186:6395435:6449931644993164522102280Amycolatopsis mediterranei S699 chromosome, complete genomeCRISPR-associated helicase Cas36e-69263
NC_014318:6395392:6449887644988764521662280Amycolatopsis mediterranei U32 chromosome, complete genomeCRISPR-associated helicase Cas36e-69263
NC_015170:54000:5707057070599612892Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequenceCRISPR-associated helicase Cas36e-67256
NC_007333:1743890:1835906183590618387402835Thermobifida fusca YX, complete genomecRISPR-associated helicase Cas3, core1e-63245
NC_013851:759500:7688657688657714982634Allochromatium vinosum DSM 180 chromosome, complete genomeCRISPR-associated helicase Cas32e-63244
NC_002932:1851070:1868933186893318715182586Chlorobium tepidum TLS, complete genomehypothetical protein3e-63244
NC_013159:1422370:1428340142834014308382499Saccharomonospora viridis DSM 43017, complete genomeCRISPR-associated helicase Cas32e-61238
NC_008609:2518993:2531914253191425345532640Pelobacter propionicus DSM 2379, complete genomeCRISPR-associated helicase Cas34e-60233
NC_010468:1029471:1036180103618010388462667Escherichia coli ATCC 8739, complete genomeCRISPR-associated helicase Cas32e-56221
NC_010473:2963951:2975117297511729777832667Escherichia coli str. K-12 substr. DH10B, complete genomeconserved protein, member of DEAD box family1e-56221
NC_000913:2873443:2882575288257528852412667Escherichia coli K12, complete genomeconserved protein, member of DEAD box family1e-56221
AC_000091:2872000:2883209288320928858752667Escherichia coli W3110 DNA, complete genomeconserved hypothetical protein, member of DEAD box family1e-56221
NC_012759:2757826:2768387276838727710532667Escherichia coli BW2952 chromosome, complete genomehypothetical protein1e-56221
NC_015436:1287873:1293817129381712964352619Spirochaeta coccoides DSM 17374 chromosome, complete genomeCRISPR-associated helicase Cas38e-56219
NC_009800:2889928:2901786290178629044522667Escherichia coli HS, complete genomeCRISPR-associated helicase Cas31e-54215
NC_015676:1663700:1675169167516916779222754Methanosalsum zhilinae DSM 4017 chromosome, complete genomeCRISPR-associated helicase Cas32e-54214
NC_014355:1461355:1466467146646714691962730Candidatus Nitrospira defluvii, complete genomeCRISPR-associated helicase Cas31e-50202
NC_015951:107360:1140161140161167872772Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, completeCRISPR-associated helicase Cas36e-50199
NC_013850:985331:9897249897249924172694Klebsiella variicola At-22 chromosome, complete genomeCRISPR-associated helicase Cas34e-48194
NC_012912:1053618:1059035105903510616502616Dickeya zeae Ech1591, complete genomeCRISPR-associated helicase Cas32e-47191
NC_002939:1505701:1512324151232415149752652Geobacter sulfurreducens PCA, complete genomeCRISPR-associated helicase Cas32e-47191
NC_008340:1075500:1085465108546510880802616Alkalilimnicola ehrlichei MLHE-1, complete genomeCRISPR-associated helicase Cas32e-43178
NC_002935:2292835:2302097230209723047272631Corynebacterium diphtheriae NCTC 13129, complete genomePutative helicase3e-43177
NC_016786:2235731:2246368224636822489982631Corynebacterium diphtheriae HC01 chromosome, complete genomeCRISPR-associated protein1e-42175
NC_016782:2235000:2245769224576922483992631Corynebacterium diphtheriae 241 chromosome, complete genomeCRISPR-associated protein1e-42175
NC_007643:185135:2063192063192090812763Rhodospirillum rubrum ATCC 11170, complete genomeCRISPR-associated helicase Cas3, core6e-41169
NC_015966:521703:5467875467875490452259Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeCRISPR-associated helicase Cas38e-34146
NC_012440:1249941:1259969125996912622182250Persephonella marina EX-H1, complete genomecrispr-associated helicase Cas32e-23112
NC_016610:2489415:2495937249593724980212085Tannerella forsythia ATCC 43037 chromosome, complete genomeCRISPR-associated helicase Cas34e-22107
NC_009486:1103915:1112028111202811143192292Thermotoga petrophila RKU-1 chromosome, complete genomeCRISPR-associated helicase Cas34e-22107
NC_015966:1316901:1323321132332113254982178Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomemetal dependent phosphohydrolase6e-22107
NC_015388:89000:99529995291013341806Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeCRISPR-associated helicase Cas31e-21105
NC_010803:483713:4952324952324974842253Chlorobium limicola DSM 245, complete genomeCRISPR-associated helicase Cas35e-21103
NC_014150:1423758:1423758142375814260522295Brachyspira murdochii DSM 12563 chromosome, complete genomeCRISPR-associated helicase Cas31e-20102
NC_010424:1356000:1362881136288113652682388Candidatus Desulforudis audaxviator MP104C, complete genomeCRISPR-associated helicase Cas33e-20101
NC_013849:1595924:1614550161455016161781629Ferroglobus placidus DSM 10642 chromosome, complete genomeCRISPR-associated helicase Cas32e-20101
NC_015975:1056731:1070620107062010729322313Lactobacillus ruminis ATCC 27782 chromosome, complete genomeCRISPR-associated helicase Cas33e-20100
NC_014206:1467000:1474954147495414771312178Geobacillus sp. C56-T3 chromosome, complete genomeCRISPR-associated helicase Cas34e-20100
NC_000961:135493:1538931538931559652073Pyrococcus horikoshii OT3, complete genomehypothetical protein5e-20100
NC_015571:290355:3024493024493047522304Porphyromonas gingivalis TDC60, complete genomeCRISPR-associated helicase Cas33e-1997.8
NC_015680:1275252:1275252127525212773302079Pyrococcus yayanosii CH1 chromosome, complete genomeCRISPR-associated helicase Cas3 domain-containing protein3e-1894.4
NC_009973:77518:9643396433988472415Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU01, completeCRISPR-associated helicase Cas31e-1792.4
NC_002950:2098454:2106124210612421084602337Porphyromonas gingivalis W83, complete genomeCRISPR-associated helicase Cas31e-1792.4
NC_015557:583475:5965515965515988422292Hydrogenobaculum sp. 3684 chromosome, complete genomeCRISPR-associated helicase Cas36e-1790.1
NC_015587:583530:5966065966065988972292Hydrogenobaculum sp. SHO chromosome, complete genomeCRISPR-associated helicase Cas36e-1790.1
NC_020411:583503:5965795965795988702292Hydrogenobaculum sp. HO, complete genomeCRISPR-associated helicase Cas36e-1790.1
NC_013216:921377:9279929279929302262235Desulfotomaculum acetoxidans DSM 771, complete genomeCRISPR-associated helicase Cas32e-1688.6
NC_017096:260333:2653822653822676282247Caldisericum exile AZM16c01, complete genomeputative CRISPR-associated protein6e-1687
NC_000918:246792:2467922467922489812190Aquifex aeolicus VF5, complete genomehypothetical protein1e-1585.9
NC_019942:1370872:1377646137764613798472202Aciduliprofundum sp. MAR08-339, complete genomeDEAD/DEAH box helicase1e-1482.4
NC_020126:10091703:1010406510104065101063772313Myxococcus stipitatus DSM 14675, complete genomeATP-dependent RNA helicase2e-1482
NC_020134:2067476:2074883207488320770962214Clostridium stercorarium subsp. stercorarium DSM 8532, completeCRISPR-associated helicase Cas33e-1481.6
NC_019978:922978:9399719399719423132343Halobacteroides halobius DSM 5150, complete genomeCRISPR-associated helicase Cas35e-1480.5
NC_015680:841783:8449328449328471092178Pyrococcus yayanosii CH1 chromosome, complete genomeCRISPR-associated helicase Cas35e-1480.5
NC_011296:1039749:1058944105894410605751632Thermodesulfovibrio yellowstonii DSM 11347, complete genomeCRISPR-associated helicase Cas36e-1480.5
NC_013894:1:1428214282159881707Thermocrinis albus DSM 14484 chromosome, complete genomeCRISPR-associated helicase Cas32e-1378.6
NC_013510:1023348:1039357103935710424403084Thermomonospora curvata DSM 43183, complete genomemetal dependent phosphohydrolase5e-1377
NC_012438:776260:7906217906217929092289Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeCRISPR-associated helicase Cas31e-1276.3
NC_000916:983500:1001172100117210036642493Methanothermobacter thermautotrophicus str. Delta H, completehypothetical protein3e-1274.7
NC_013501:1881692:1900060190006019024352376Rhodothermus marinus DSM 4252, complete genomeCRISPR-associated helicase Cas33e-1274.7
NC_000917:40111:6883068830711092280Archaeoglobus fulgidus DSM 4304, complete genomeATP-dependent RNA helicase, putative5e-1273.9
NC_015573:2975000:2983739298373929862492511Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeCRISPR-associated helicase Cas31e-1173.2
NC_016051:460624:4687704687704713762607Thermococcus sp. AM4 chromosome, complete genomeCRISPR-associated helicase Cas32e-1172
NC_011978:699500:7103537103537115461194Thermotoga neapolitana DSM 4359, complete genomeCRISPR-associated helicase, Cas3 family3e-1171.2
NC_015865:685882:6936206936206959262307Thermococcus sp. 4557 chromosome, complete genomeCRISPR-associated helicase Cas3-like protein4e-1171.2
NC_020134:1783000:1791244179124417935892346Clostridium stercorarium subsp. stercorarium DSM 8532, completeCRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD4e-1170.9
NC_009921:1668306:1682199168219916846342436Frankia sp. EAN1pec, complete genomeCRISPR-associated helicase Cas38e-1170.1
NC_014831:1140356:1146456114645611495213066Thermaerobacter marianensis DSM 12885 chromosome, complete genomeCRISPR-associated helicase Cas3, Anaes-subtype1e-1069.7
NC_015680:841783:8522428522428538221581Pyrococcus yayanosii CH1 chromosome, complete genomeCRISPR-associated helicase Cas36e-1067
NC_007681:1082000:1085878108587810886312754Methanosphaera stadtmanae DSM 3091, complete genomepredicted helicase1e-0966.2
NC_015416:2723189:2751286275128627537542469Methanosaeta concilii GP-6 chromosome, complete genomecrispr-associated helicase Cas31e-0965.9
NC_012589:633500:6413616413616428661506Sulfolobus islandicus L.S.2.15, complete genomeCRISPR-associated helicase Cas32e-0965.1
NC_012622:681472:7119947119947134991506Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeCRISPR-associated helicase Cas32e-0965.1
NC_016645:797000:8060948060948075661473Pyrobaculum sp. 1860 chromosome, complete genomeCRISPR-associated helicase Cas33e-0964.7
NC_013769:800000:8077438077438092661524Sulfolobus islandicus L.D.8.5 chromosome, complete genomeCRISPR-associated helicase Cas34e-0964.3
NC_012623:1874348:1881727188172718832321506Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeCRISPR-associated helicase Cas34e-0964.3
NC_002754:1811500:1817612181761218191591548Sulfolobus solfataricus P2, complete genomeATP-dependent RNA helicase homolog5e-0963.9
NC_012632:943104:9537599537599552641506Sulfolobus islandicus M.16.27 chromosome, complete genomeCRISPR-associated helicase Cas36e-0963.5
NC_014098:2735500:2740062274006227426232562Bacillus tusciae DSM 2912 chromosome, complete genomeCRISPR-associated helicase Cas37e-0963.5
NC_017275:342000:3508063508063523111506Sulfolobus islandicus HVE10/4 chromosome, complete genomeCRISPR-associated helicase Cas37e-0963.5
NC_017276:735678:7456097456097471141506Sulfolobus islandicus REY15A chromosome, complete genomeCRISPR-associated helicase Cas38e-0963.5
NC_012588:857500:8650148650148665191506Sulfolobus islandicus M.14.25 chromosome, complete genomeCRISPR-associated helicase Cas31e-0862.8
NC_012726:850451:8684538684538699581506Sulfolobus islandicus M.16.4 chromosome, complete genomeCRISPR-associated helicase Cas31e-0862.8
NC_003901:678340:6852926852926877242433Methanosarcina mazei Go1, complete genomehypothetical protein2e-0862.4
NC_015416:2838020:2843201284320128456032403Methanosaeta concilii GP-6 chromosome, complete genomeCRISPR-associated helicase Cas34e-0860.8
NC_014820:117408:1205221205221232332712Cenarchaeum symbiosum A, complete genomehelicase5e-0860.8
NC_011899:1603500:1626098162609816285662469Halothermothrix orenii H 168, complete genomeCRISPR-associated helicase Cas35e-0860.8
NC_013502:102430:373728382802Rhodothermus marinus DSM 4252 plasmid pRMAR01, complete sequenceCRISPR-associated helicase Cas3, Anaes-subtype1e-0759.7
NC_012588:800942:8150738150738167191647Sulfolobus islandicus M.14.25 chromosome, complete genomeCRISPR-associated helicase Cas32e-0758.9
NC_012632:884811:9003919003919020371647Sulfolobus islandicus M.16.27 chromosome, complete genomeCRISPR-associated helicase Cas32e-0758.9
NC_013854:3126385:3146161314616131492473087Azospirillum sp. B510, complete genomehypothetical protein4e-0757.8
NC_014209:2204515:2217893221789322202472355Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,CRISPR-associated helicase Cas34e-0757.8
NC_013223:1848689:1869714186971418720562343Desulfohalobium retbaense DSM 5692, complete genomeCRISPR-associated helicase Cas37e-0757
NC_009954:1595743:1607846160784616095941749Caldivirga maquilingensis IC-167, complete genomeCRISPR-associated helicase Cas37e-0757
NC_014471:849032:8613638613638633872025Ignisphaera aggregans DSM 17230 chromosome, complete genomeCRISPR-associated helicase Cas37e-0757
NC_014915:332784:3446143446143469442331Geobacillus sp. Y412MC52 chromosome, complete genomeCRISPR-associated HD domain protein8e-0756.6
NC_015660:3467579:3467579346757934700622484Geobacillus thermoglucosidasius C56-YS93 chromosome, completeCRISPR-associated HD domain-containing protein1e-0656.2
NC_002754:1269463:1292310129231012938571548Sulfolobus solfataricus P2, complete genomeATP-dependent RNA helicase homolog1e-0656.2
NC_012108:616088:6267306267306289912262Desulfobacterium autotrophicum HRM2, complete genomeputative CRISPR-associated helicase Cas3 (ATP-dependent DNA helicase)2e-0655.8
NC_007777:3962000:3963334396333439655892256Frankia sp. CcI3, complete genomeCRISPR-associated helicase Cas3, core2e-0655.1
NC_000917:1666836:1685466168546616871061641Archaeoglobus fulgidus DSM 4304, complete genomehypothetical protein3e-0655.1
NC_013526:567500:5765085765085790842577Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeCRISPR-associated helicase Cas33e-0654.7
NC_014961:969500:9790069790069807781773Desulfurococcus mucosus DSM 2162 chromosome, complete genomeCRISPR-associated helicase Cas38e-0653.5
NC_010003:2056000:2075621207562120778132193Petrotoga mobilis SJ95, complete genomeCRISPR-associated helicase Cas39e-0653.1
NC_021184:823000:8283508283508306982349Desulfotomaculum gibsoniae DSM 7213, complete genomeCRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD9e-0653.1