Pre_GI: BLASTP Hits

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Query: NC_010498:4967724:4982418 Escherichia coli SMS-3-5, complete genome

Start: 4982418, End: 4983329, Length: 912

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008253:4817864:486061248606124861568957Escherichia coli 536, complete genomeputative HTH-type transcriptional regulator YjiE9e-168589
NC_014618:4657719:468478546847854685693909Enterobacter cloacae SCF1 chromosome, complete genomeLysR family transcriptional regulator1e-137489
NC_015761:4355335:437832143783214379229909Salmonella bongori NCTC 12419, complete genometranscriptional activator3e-137488
NC_010498:1094000:110694811069481107847900Escherichia coli SMS-3-5, complete genomeLysR family transcriptional regulator1e-86320
NC_014500:1646854:166750916675091668468960Dickeya dadantii 3937 chromosome, complete genomeputative transcriptional regulator LYSR-type5e-79294
NC_014839:253961:285337285337286230894Pantoea sp. At-9b plasmid pPAT9B02, complete sequencetranscriptional regulator, LysR family5e-63241
NC_016830:4639388:464871746487174649664948Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein6e-31134
NC_008392:1029134:105129210512921052236945Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, LysR family2e-28126
NC_010557:679656:719719719719720663945Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, LysR family8e-28124
NC_008752:1523768:152542915254291526409981Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, LysR family1e-26120
NC_010511:7024412:706405770640577064956900Methylobacterium sp. 4-46 chromosome, complete genomeLysR family transcriptional regulator9e-27120
NC_011205:839425:851527851527852474948Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853transcriptional regulator3e-26119
NC_003197:815964:827344827344828327984Salmonella typhimurium LT2, complete genometranscriptional regulator3e-26119
NC_011080:819103:831697831697832623927Salmonella enterica subsp. enterica serovar Newport str. SL254,transcriptional regulator3e-26119
NC_011274:793681:804391804391805374984Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91LysR family transcriptional regulator3e-26119
NC_011294:781170:786497786497787480984Salmonella enterica subsp. enterica serovar Enteritidis strLysR family transcriptional regulator3e-26119
NC_016810:819489:826600826600827583984Salmonella enterica subsp. enterica serovar Typhimurium strLysR family transcriptional regulator3e-26119
NC_016856:819482:827686827686828669984Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stranscriptional regulator3e-26119
NC_016857:819429:826600826600827583984Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74transcriptional regulator3e-26119
NC_016860:857500:866174866174867121948Salmonella enterica subsp. enterica serovar Typhimurium strLysR family transcriptional regulator3e-26119
NC_010102:2287934:229590922959092296856948Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-26119
NC_011083:862901:875583875583876530948Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transcriptional regulator3e-26119
NC_011149:779903:791019791019791966948Salmonella enterica subsp. enterica serovar Agona str. SL483,transcriptional regulator3e-26119
NC_017046:819414:826585826585827568984Salmonella enterica subsp. enterica serovar Typhimurium str. 798LysR family transcriptional regulator3e-26119
NC_016863:819478:827686827686828669984Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1transcriptional regulator3e-26119
NC_012779:1449500:145262814526281453527900Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-25115
NC_010505:3690000:371420837142083715122915Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, LysR family5e-25115
NC_010172:480000:501034501034501966933Methylobacterium extorquens PA1, complete genomeregulatory protein LysR6e-25114
NC_002516:891000:893041893041893994954Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator3e-24112
NC_008463:4743296:476339247633924764345954Pseudomonas aeruginosa UCBPP-PA14, complete genomeprobable transcriptional regulator7e-24111
NC_009648:838000:847570847570848496927Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genometranscriptional regulator LysR1e-22107
NC_012982:1597697:161437016143701615248879Hirschia baltica ATCC 49814, complete genometranscriptional regulator, LysR family2e-22106
NC_007492:3180480:320079332007933201665873Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, LysR family3e-21102
NC_008740:443274:518011518011518916906Marinobacter aquaeolei VT8, complete genometranscriptional regulator, LysR family2e-1997.1
NC_012855:39751:435104351044421912Ralstonia pickettii 12D plasmid pRp12D01, complete sequencetranscriptional regulator, LysR family4e-1685.5
NC_015563:4024450:403023140302314031166936Delftia sp. Cs1-4 chromosome, complete genomeLysR family transcriptional regulator6e-1685.1
NC_010002:3465509:347800334780033478938936Delftia acidovorans SPH-1, complete genometranscriptional regulator, LysR family7e-1684.7
NC_008781:2883968:290409629040962905004909Polaromonas naphthalenivorans CJ2, complete genometranscriptional regulator, LysR family1e-1170.5
NC_015726:2177783:219436621943662195274909Cupriavidus necator N-1 chromosome 1, complete sequenceLysR family transcriptional regulator1e-1170.5
NC_016628:1190366:120946812094681210349882Vibrio furnissii NCTC 11218 chromosome 2, complete sequencetranscriptional regulator, LysR family protein1e-1067.8
NC_011000:1262324:1288301128830112893141014Burkholderia cenocepacia J2315 chromosome 1, complete sequenceLysR family regulatory protein5e-1065.5
NC_008313:2629281:263702826370282637957930Ralstonia eutropha H16 chromosome 1, complete sequencetranscriptional regulator, LysR-family5e-1065.1
NC_011000:1023800:102715410271541028041888Burkholderia cenocepacia J2315 chromosome 1, complete sequenceLysR family regulatory protein7e-1065.1
NC_010506:2146444:215187221518722152747876Shewanella woodyi ATCC 51908, complete genometranscriptional regulator, LysR family1e-0964.3
NC_015759:760671:774183774183775061879Weissella koreensis KACC 15510 chromosome, complete genometranscriptional regulator, LysR family protein1e-0964.3
NC_014532:2268078:229234622923462293248903Halomonas elongata DSM 2581, complete genometranscriptional regulator, LysR family1e-0963.9
NC_016901:2916988:293613829361382937016879Shewanella baltica OS678 chromosome, complete genomeLysR family transcriptional regulator1e-0963.9
NC_009997:2967521:298667129866712987549879Shewanella baltica OS195, complete genometranscriptional regulator, LysR family1e-0963.9
NC_009255:916000:918699918699919616918Burkholderia vietnamiensis G4 chromosome 2, complete sequenceLysR family transcriptional regulator3e-0962.8
NC_013850:2624899:263582026358202636755936Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, LysR family4e-0962.4
NC_009439:442890:484747484747485631885Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator5e-0962
NC_011283:2627050:263892426389242639859936Klebsiella pneumoniae 342 chromosome, complete genomeLysR family transcriptional regulator6e-0961.6
NC_010170:2374852:237485223748522375748897Bordetella petrii, complete genometranscriptional regulator, LysR-family7e-0961.6
NC_014307:3240430:324997232499723250898927Ralstonia solanacearum CFBP2957 chromosome, complete genometranscriptional regulator protein1e-0860.5
NC_009720:3281000:328845532884553289330876Xanthobacter autotrophicus Py2, complete genomeLysR family transcriptional regulator1e-0860.5
NC_013446:2623528:264278126427812643671891Comamonas testosteroni CNB-2, complete genomeputative LysR-family transcriptional regulator1e-0860.5
NC_015690:1109335:116494511649451165829885Paenibacillus mucilaginosus KNP414 chromosome, complete genomeLysR family transcriptional regulator2e-0860.1
NC_016935:1636278:173025017302501731134885Paenibacillus mucilaginosus 3016 chromosome, complete genomeLysR family transcriptional regulator2e-0860.1
NC_013316:2623199:262501926250192625891873Clostridium difficile R20291, complete genomeLysR-family regulatory protein2e-0860.1
NC_013315:2531019:254446325444632545335873Clostridium difficile CD196 chromosome, complete genomeLysR family transcriptional regulator2e-0860.1
NC_017179:2539031:255247525524752553347873Clostridium difficile BI1, complete genomeLysR family transcriptional regulator2e-0860.1
NC_013283:113660:136421364214583942Cronobacter turicensis plasmid pCTU1, complete sequencehypothetical protein2e-0859.7
NC_013406:3975512:398048739804873981392906Paenibacillus sp. Y412MC10 chromosome, complete genomeLysR family transcriptional regulator3e-0859.3
NC_020272:430500:444222444222445103882Bacillus amyloliquefaciens IT-45, complete genomeLysR family transcriptional regulator3e-0859.3
NC_015711:7905360:790987079098707910784915Myxococcus fulvus HW-1 chromosome, complete genomeLysR family transcriptional regulator4e-0858.9
NC_016048:3856665:386821238682123869141930Oscillibacter valericigenes Sjm18-20, complete genomeputative LysR family transcriptional regulator4e-0858.9
NC_014727:995480:100973510097351010625891Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,hypothetical protein4e-0858.9
NC_010557:679656:724454724454725359906Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, LysR family4e-0858.9
NC_014479:3510972:351242135124213513302882Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeLysR family transcriptional regulator6e-0858.5
NC_009832:2460027:247533424753342476263930Serratia proteamaculans 568, complete genometranscriptional regulator, LysR family6e-0858.5
NC_015663:2807574:282295328229532823852900Enterobacter aerogenes KCTC 2190 chromosome, complete genomeYbhD8e-0858.2
NC_009997:415808:427983427983428882900Shewanella baltica OS195, complete genometranscriptional regulator, LysR family8e-0858.2
NC_016901:414670:426845426845427744900Shewanella baltica OS678 chromosome, complete genomeLysR family transcriptional regulator8e-0858.2
NC_014008:354292:392991392991393962972Coraliomargarita akajimensis DSM 45221 chromosome, complete genometranscriptional regulator, LysR family8e-0858.2
NC_013521:2254534:226969922696992270571873Sanguibacter keddieii DSM 10542, complete genometranscriptional regulator7e-0858.2
NC_004193:3530000:354330135433013544176876Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator1e-0757.8
NC_019897:329945:370999370999371877879Thermobacillus composti KWC4 chromosome, complete genometranscriptional regulator9e-0857.8
NC_008543:2035292:205229420522942053181888Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, LysR family1e-0757.4
NC_016002:2825017:283463628346362835517882Pseudogulbenkiania sp. NH8B, complete genomeLysR family transcriptional regulator1e-0757.4
NC_021150:4350461:436487743648774365785909Azotobacter vinelandii CA6, complete genomeLysR family transcriptional regulator protein1e-0757.4
NC_012560:4350465:436488143648814365789909Azotobacter vinelandii DJ, complete genomeLysR family transcriptional regulator protein1e-0757.4
NC_015137:1207769:122387612238761224742867Burkholderia sp. CCGE1001 chromosome 2, complete sequenceLysR family transcriptional regulator2e-0757
NC_010086:1907959:191474219147421915728987Burkholderia multivorans ATCC 17616 chromosome 2, completetranscriptional regulator, LysR family2e-0757
NC_009648:2252757:225354722535472254419873Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeLysR family transcriptional regulator2e-0757
NC_011283:2323687:234077623407762341648873Klebsiella pneumoniae 342 chromosome, complete genometranscriptional regulator BudR2e-0757
NC_012731:2974745:297695029769502977822873Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeLysR family transcriptional regulator2e-0757
NC_016845:3024041:302483130248313025703873Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,LysR family transcriptional regulator2e-0757
NC_010805:530876:559660559660560562903Burkholderia multivorans ATCC 17616 chromosome 2, completeLysR family transcriptional regulator2e-0756.6
NC_009436:1679265:167926516792651680176912Enterobacter sp. 638, complete genomeLysR family transcriptional regulator3e-0756.2
NC_005085:2014987:204352020435202044464945Chromobacterium violaceum ATCC 12472, complete genomecyn operon transcriptional regulator3e-0756.2
NC_020064:3157656:317487131748713175794924Serratia marcescens FGI94, complete genometranscriptional regulator3e-0756.2
NC_018681:5695343:571462357146235715504882Nocardia brasiliensis ATCC 700358 chromosome, complete genomeLysR family transcriptional regulator4e-0755.8
NC_009438:2058566:206876720687672069660894Shewanella putrefaciens CN-32 chromosome, complete genomeLysR family transcriptional regulator4e-0755.8
NC_009512:3068495:308697430869743087852879Pseudomonas putida F1, complete genometranscriptional regulator, LysR family4e-0755.8
NC_015856:2488297:249250524925052493410906Collimonas fungivorans Ter331 chromosome, complete genomeputative transcriptional regulator4e-0755.8
NC_008392:1029134:105602910560291056934906Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, LysR family3e-0755.8
NC_013740:2218215:222678722267872227674888Acidaminococcus fermentans DSM 20731, complete genometranscriptional regulator, LysR family3e-0755.8
NC_014306:3102000:310559931055993106534936Erwinia billingiae Eb661, complete genomeTranscriptional regulator, LysR family4e-0755.5
NC_017986:5833819:583607958360795836951873Pseudomonas putida ND6 chromosome, complete genomecatBC operon regulator4e-0755.5
NC_015977:2966971:297104029710402971894855Roseburia hominis A2-183 chromosome, complete genomeLysR family transcriptional regulator5e-0755.5
NC_014623:4683671:468845046884504689409960Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeLysR family transcriptional regulator7e-0755.1
NC_007650:420745:427198427198428085888Burkholderia thailandensis E264 chromosome II, complete sequencetranscriptional regulator, LysR family6e-0755.1
NC_015138:2025000:204546920454692046365897Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeLysR family transcriptional regulator6e-0755.1
NC_015738:1858455:1869786186978618708051020Eggerthella sp. YY7918, complete genometranscriptional regulator5e-0755.1
NC_014098:3133440:313717031371703138072903Bacillus tusciae DSM 2912 chromosome, complete genometranscriptional regulator, LysR family8e-0754.7
NC_010508:2776283:279216327921632793125963Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetranscriptional regulator, LysR family8e-0754.7
NC_017986:5467279:546907954690795469957879Pseudomonas putida ND6 chromosome, complete genomeLysR family transcriptional regulator8e-0754.7
NC_015727:1294532:130050613005061300742237Cupriavidus necator N-1 plasmid BB1p, complete sequenceLysR family transcriptional regulator7e-0754.7
NC_016830:530397:532354532354533244891Pseudomonas fluorescens F113 chromosome, complete genomeprotein YnfL1e-0654.3
NC_012724:2202173:220217322021732203075903Burkholderia glumae BGR1 chromosome 1, complete genomePutative transcriptional regulator1e-0654.3
NC_017075:4259460:426246242624624263397936Rubrivivax gelatinosus IL144, complete genomeLysR family transcriptional regulator1e-0654.3
NC_021150:2451500:247040624704062471359954Azotobacter vinelandii CA6, complete genomeLysR family transcriptional regulator protein1e-0653.9
NC_012560:2451500:247039424703942471347954Azotobacter vinelandii DJ, complete genomeLysR family transcriptional regulator protein1e-0653.9
NC_020064:3157656:317869831786983179582885Serratia marcescens FGI94, complete genometranscriptional regulator1e-0653.9
NC_009717:271385:2770072770072781341128Xanthobacter autotrophicus Py2 plasmid pXAUT01, complete sequenceLysR family transcriptional regulator1e-0653.9
NC_014976:2175667:217706921770692177947879Bacillus subtilis BSn5 chromosome, complete genomeputative LysR family transcriptional regulator1e-0653.9
NC_014650:475662:500063500063500962900Geobacillus sp. Y4.1MC1 chromosome, complete genomeLysR family transcriptional regulator1e-0653.9
NC_016514:1183356:120316712031671204048882Enterobacter cloacae EcWSU1 chromosome, complete genomeHTH-type transcriptional regulator BudR2e-0653.5
NC_014153:2125551:213833321383332139232900Thiomonas intermedia K12 chromosome, complete genometranscriptional regulator, LysR family2e-0653.5
NC_010552:2089140:210838421083842109271888Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetranscriptional regulator, LysR family2e-0653.5
NC_015437:918614:924170924170925060891Selenomonas sputigena ATCC 35185 chromosome, complete genometranscriptional regulator, LysR family2e-0653.5
NC_014310:1130344:113544611354461136363918Ralstonia solanacearum PSI07 megaplasmid, complete sequenceLysR family transcriptional regulator2e-0653.1
NC_009925:1003000:101786010178601018756897Acaryochloris marina MBIC11017, complete genometranscriptional regulator, LysR family2e-0653.1
NC_014121:3188928:319290931929093193790882Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeLysR family transcriptional regulator2e-0653.1
NC_009831:1539159:155629415562941557100807Shewanella sediminis HAW-EB3, complete genomeTranscriptional regulator-like protein3e-0652.8
NC_020211:379000:389850389850390767918Serratia marcescens WW4, complete genometranscriptional regulator CatR3e-0652.8
NC_012914:5194791:520850852085085209395888Paenibacillus sp. JDR-2, complete genometranscriptional regulator, LysR family3e-0652.8
NC_015566:3417951:345404234540423454941900Serratia sp. AS12 chromosome, complete genomeLysR family transcriptional regulator3e-0652.8
NC_008269:428898:444555444555445487933Rhodococcus sp. RHA1 plasmid pRHL1, complete sequencetranscriptional regulator, LysR family4e-0652.4
NC_015275:3761889:376374637637463764609864Clostridium lentocellum DSM 5427 chromosome, complete genometranscriptional regulator, LysR family4e-0652.4
NC_009832:3500000:350236335023633503262900Serratia proteamaculans 568, complete genometranscriptional regulator, LysR family4e-0652.4
NC_017347:2437902:245234824523482453232885Staphylococcus aureus subsp. aureus T0131 chromosome, completeLysR family transcriptional regulator4e-0652.4
NC_012881:3520956:354014435401443541031888Desulfovibrio salexigens DSM 2638, complete genometranscriptional regulator, LysR family4e-0652.4
NC_012214:1:216972169722578882Erwinia pyrifoliae Ep1/96, complete genomeHTH-type transcriptional regulator BudR (Bud operon transcriptional regulator)4e-0652.4
NC_014323:4355266:436104943610494361951903Herbaspirillum seropedicae SmR1 chromosome, complete genomeLysR family transcription regulator protein4e-0652.4
NC_015381:1623587:166449516644951665412918Burkholderia gladioli BSR3 chromosome 1, complete sequenceLysR family transcriptional regulator4e-0652.4
NC_014307:2735934:2755632275563227566481017Ralstonia solanacearum CFBP2957 chromosome, complete genomeLysR family transcriptional regulator3e-0652.4
NC_014306:642152:659268659268660179912Erwinia billingiae Eb661, complete genomeTranscriptional regulator, LysR family6e-0652
NC_017033:2081206:208320120832012084145945Frateuria aurantia DSM 6220 chromosome, complete genometranscriptional regulator6e-0652
NC_020244:4020315:402031540203154021193879Bacillus subtilis XF-1, complete genomehypothetical protein6e-0652
NC_012660:3320330:334445233444523345342891Pseudomonas fluorescens SBW25 chromosome, complete genomeputative LysR family transcriptional regulator6e-0652
NC_007509:1043602:106512310651231066031909Burkholderia sp. 383 chromosome 3, complete sequencetranscriptional regulator, LysR family5e-0652
NC_010694:1:205502055021431882Erwinia tasmaniensis, complete genomeHTH-type transcriptional regulator BudR (Bud operon transcriptional regulator)5e-0652
NC_013421:1545386:155997915599791560881903Pectobacterium wasabiae WPP163, complete genometranscriptional regulator, LysR family5e-0652
NC_009439:2427120:243917324391732440075903Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator8e-0651.6
NC_020209:1949500:197284619728461973721876Pseudomonas poae RE*1-1-14, complete genomecat operon regulatory protein7e-0651.6
NC_013440:811780:834418834418835320903Haliangium ochraceum DSM 14365, complete genometranscriptional regulator, LysR family7e-0651.6
NC_019842:3921424:392335039233503924240891Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein7e-0651.6
NC_016935:2347691:238639223863922387267876Paenibacillus mucilaginosus 3016 chromosome, complete genomeLysR family transcriptional regulator6e-0651.6
NC_009725:3878862:388006538800653880955891Bacillus amyloliquefaciens FZB42, complete genomeYybE6e-0651.6
NC_016935:2503071:252203525220352522907873Paenibacillus mucilaginosus 3016 chromosome, complete genomeLysR family transcriptional regulator8e-0651.2
NC_010334:1561691:157134715713471572246900Shewanella halifaxensis HAW-EB4, complete genometranscriptional regulator, LysR family8e-0651.2
NC_015690:1967244:1990674199067419916901017Paenibacillus mucilaginosus KNP414 chromosome, complete genomeLysR family transcriptional regulator9e-0651.2