Pre_GI: BLASTP Hits

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Query: NC_010322:1336231:1336231 Pseudomonas putida GB-1 chromosome, complete genome

Start: 1336231, End: 1336554, Length: 324

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida strain GB-1, a fresh water, Gram-negative gamma-proteobacterium, is a genetically tractable, robust manganese (Mn) oxidizer, and as such, is an ideal model for unraveling the catalytic mechanism for, and the molecular regulation of Mn(IV) oxide production and its eventual accumulation on the cell surface at the onset of stationary phase. Since its isolation from Green Bay nearly 20 years ago by Ken Nealson’s group (then at the Center for Great Lakes Studies, Univ. Wisconsin-Milwaukee, USA), it has been the non spore-forming, model organism (along with the closely-related strain MnB1) for molecular genetic studies of Mn(II) oxidization, protein transport and biofilm formation and for biochemical studies on protein purification and Mn(III)-pyoverdine binding. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015572:65597:904699046990792324Methylomonas methanica MC09 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein3e-42170
NC_010002:5111665:511533851153385115667330Delftia acidovorans SPH-1, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein1e-37154
NC_008344:49039:123841123841124164324Nitrosomonas eutropha C91, complete genome4Fe-4S ferredoxin, iron-sulfur binding domain protein5e-36149
NC_010725:4618000:462064546206454620983339Methylobacterium populi BJ001, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein2e-35147
NC_008702:1094663:110878411087841109107324Azoarcus sp. BH72, complete genomeprobable ferredoxin6e-35145
NC_015942:63440:786567865678985330Acidithiobacillus ferrivorans SS3 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein1e-33141
NC_016937:1850382:185205118520511852374324Francisella tularensis subsp. tularensis TI0902 chromosome,Ferredoxin6e-32135
NC_009257:5615:203012030120624324Francisella tularensis subsp. tularensis WY96-3418 chromosome,4Fe-4S ferredoxin6e-32135
NC_008369:82515:834308343083753324Francisella tularensis subsp. holarctica OSU18, complete genomeferredoxin6e-32135
NC_008245:1845525:185198118519811852304324Francisella tularensis subsp. tularensis FSC 198, complete genomeFerredoxin6e-32135
NC_010510:409469:426627426627426965339Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete4Fe-4S ferredoxin iron-sulfur binding domain protein2e-31134
NC_008783:119758:138644138644138982339Bartonella bacilliformis KC583, complete genomeferredoxin1e-31134
NC_014932:1387818:139235313923531392691339Bartonella clarridgeiae 73, complete genomeferredoxin II1e-31134
NC_006831:4500:9675967510052378Ehrlichia ruminantium str. Gardel, complete genomeFerredoxin2e-28124
NC_005295:21995:285522855228929378Ehrlichia ruminantium str. Welgevonden, complete genomeferredoxin2e-28124
NC_014032:374426:374426374426374851426Salinibacter ruber M8 chromosome, complete genomeferredoxin4e-26116
NC_004842:1132441:115303111530311153402372Anaplasma marginale str. St. Maries, complete genomeferredoxin II2e-24110
NC_012026:1135041:115723911572391157610372Anaplasma marginale str. Florida, complete genomeferredoxin II (fdxA)2e-24110
NC_013532:85371:902849028490655372Anaplasma centrale str. Israel, complete genomeferredoxin2e-24110
NC_000963:1024000:104387310438731044202330Rickettsia prowazekii str. Madrid E, complete genomeFERREDOXIN (fdxA)4e-22103
NC_017048:225980:274302274302274634333Rickettsia prowazekii str. GvV257 chromosome, complete genomeferredoxin (fdxA)4e-22103
NC_017049:1022000:104215410421541042483330Rickettsia prowazekii str. Chernikova chromosome, complete genomeferredoxin (fdxA)4e-22103
NC_017050:1024000:104380410438041044133330Rickettsia prowazekii str. Katsinyian chromosome, complete genomeferredoxin (fdxA)4e-22103
NC_017056:995500:104379510437951044124330Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomeferredoxin (fdxA)4e-22103
NC_017057:1024000:104445610444561044788333Rickettsia prowazekii str. RpGvF24 chromosome, complete genomeferredoxin (fdxA)4e-22103
NC_007947:577315:585194585194585499306Methylobacillus flagellatus KT, complete genome4Fe-4S ferredoxin, iron-sulfur binding7e-2095.9
NC_007798:260324:270789270789271208420Neorickettsia sennetsu str. Miyayama, complete genomeferredoxin7e-1992.4
NC_013009:270000:282035282035282454420Neorickettsia risticii str. Illinois, complete genomeferredoxin1e-1892
NC_014039:708427:711584711584711904321Propionibacterium acnes SK137 chromosome, complete genomeferredoxin family protein1e-1684.7
NC_016511:678582:684878684878685198321Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeferredoxin family protein1e-1684.7
NC_016512:679688:684263684263684583321Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeferredoxin family protein1e-1684.7
NC_013510:1295439:131256713125671312890324Thermomonospora curvata DSM 43183, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein9e-1682
NC_007777:4597379:462239946223994622722324Frankia sp. CcI3, complete genome4Fe-4S ferredoxin, iron-sulfur binding4e-1580.1
NC_009749:77583:834878348783717231Francisella tularensis subsp. holarctica FTA, complete genomeferredoxin-17e-1579.3
NC_008699:1247423:126644312664431266769327Nocardioides sp. JS614, complete genome4Fe-4S ferredoxin, iron-sulfur binding domain protein8e-1579
NC_009480:739395:752015752015752341327Clavibacter michiganensis subsp. michiganensis NCPPB 382, completehypothetical protein2e-1477.4
NC_015161:2018493:203581220358122036048237Deinococcus proteolyticus MRP chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein3e-1477.4
NC_013093:832971:851796851796852122327Actinosynnema mirum DSM 43827, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein5e-1476.3
NC_018720:1510084:152886215288621529248387Bifidobacterium asteroides PRL2011 chromosome, complete genomeferredoxin7e-1475.9
NC_014098:1670327:169521116952111695447237Bacillus tusciae DSM 2912 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein2e-1374.3
NC_016943:4692561:469708546970854697426342Blastococcus saxobsidens DD2, complete genomeFerredoxin5e-1372.8
NC_016884:2568920:258760025876002587875276Sulfobacillus acidophilus DSM 10332 chromosome, complete genome4Fe-4S ferredoxin2e-0961.2
NC_016884:2568920:258826725882672588536270Sulfobacillus acidophilus DSM 10332 chromosome, complete genome4Fe-4S ferredoxin3e-0960.8
NC_017904:1763015:1779497177949717811131617Mycobacterium sp. MOTT36Y chromosome, complete genome4Fe-4S ferredoxin6e-0856.2
NC_018581:1718023:1726620172662017283111692Gordonia sp. KTR9 chromosome, complete genomeNADPH-dependent glutamate synthase beta chain-related oxidoreductase2e-0754.7
NC_008268:7576365:7592358759235875937611404Rhodococcus sp. RHA1, complete genomeprobable ferredoxin--NADP(+) reductase7e-0752.8
NC_015850:1947000:197270719727071972868162Acidithiobacillus caldus SM-1 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein7e-0649.3