Pre_GI: BLASTP Hits

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Query: NC_010102:1616530:1637389 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1637389, End: 1637979, Length: 591

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005085:2774370:278291727829172783774858Chromobacterium violaceum ATCC 12472, complete genomeprobable secreted protein EspA5e-0960.8
NC_005085:2774370:278572527857252786279555Chromobacterium violaceum ATCC 12472, complete genomeprobable secreted protein EspA2e-1168.6
NC_005085:2774370:278384227838422784402561Chromobacterium violaceum ATCC 12472, complete genomeprobable secreted protein EspA2e-1168.9
NC_005085:2774370:278486927848692785657789Chromobacterium violaceum ATCC 12472, complete genomeprobable secreted protein EspA2e-0755.5
NC_011601:4096427:410707341070734107651579Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometranslocon EspA4e-0651.2
NC_010067:1507823:153228215322821532878597Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-86318
NC_011149:1710601:173146017314601732050591Salmonella enterica subsp. enterica serovar Agona str. SL483,secretion system effector SseB3e-107387
NC_006905:1509093:152162215216221522212591Salmonella enterica subsp. enterica serovar Choleraesuis strSecretion system effector SseB1e-109395
NC_011205:1852665:187352418735241874114591Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853secretion system effector SseB4e-107387
NC_011294:1723852:174471117447111745301591Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island effector protein4e-107387
NC_011274:1763676:178453517845351785125591Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island effector protein3e-106383
NC_016831:1236786:124930712493071249897591Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative pathogenicity island effector effector protein4e-106383
NC_011083:1476894:148944914894491490039591Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,secretion system effector SseB1e-108392
NC_011080:1470794:148337414833741483964591Salmonella enterica subsp. enterica serovar Newport str. SL254,secretion system effector SseB4e-107387
NC_011147:1502096:152295515229551523545591Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island effector protein3e-108390
NC_006511:1506915:152777415277741528364591Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative pathogenicity island effector effector protein3e-108390
NC_012125:2360815:238167423816742382264591Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity island effector protein7e-109392
NC_011094:1435347:144783914478391448429591Salmonella enterica subsp. enterica serovar Schwarzengrund strsecretion system effector protein SseB3e-108390
NC_003198:1621347:164220616422061642796591Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative pathogenicity island effector effector protein4e-107387
NC_016832:1324820:133731313373131337903591Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Secreted effector protein sseB4e-107387
NC_004631:1325817:133834013383401338930591Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pathogenicity island effector protein4e-107387
NC_016860:1469066:148162114816211482211591Salmonella enterica subsp. enterica serovar Typhimurium strputative pathogenicity island effector protein4e-107387
NC_016810:1428201:144078614407861441376591Salmonella enterica subsp. enterica serovar Typhimurium strputative pathogenicity island effector protein4e-107387
NC_016856:1481325:149391014939101494500591Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stranslocation machinery component4e-107387
NC_017046:1428272:144089914408991441447549Salmonella enterica subsp. enterica serovar Typhimurium str. 798pathogenicity island effector effector protein3e-98357
NC_016857:1428201:144078614407861441376591Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative pathogenicity island effector protein4e-107387
NC_016863:1429516:144210114421011442691591Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1enhanced serine sensitivity protein SseB4e-107387
NC_003197:1471349:148393414839341484524591Salmonella typhimurium LT2, complete genometranslocation machinery component4e-107387
NC_014012:2565329:258322025832202583795576Shewanella violacea DSS12, complete genomesecreted protein EspA, putative2e-21102
NC_014012:2565329:258236525823652583180816Shewanella violacea DSS12, complete genomehypothetical protein1e-1375.9