Query: NC_010001:3266561 Clostridium phytofermentans ISDg, complete genome
Start: 3266561, End: 3286205, Length: 19645
Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria
General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_007530:3616828* | 3616828 | 3676378 | 59551 | Bacillus anthracis str. 'Ames Ancestor', complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_003997:3617000* | 3617000 | 3674607 | 57608 | Bacillus anthracis str. Ames, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_005945:3636321* | 3636321 | 3680072 | 43752 | Bacillus anthracis str. Sterne, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_003909:3606177* | 3606177 | 3649599 | 43423 | Bacillus cereus ATCC 10987, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_014335:3589726* | 3589726 | 3625599 | 35874 | Bacillus cereus biovar anthracis str. CI chromosome, complete | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_006274:3697255* | 3697255 | 3725930 | 28676 | Bacillus cereus E33L, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_011772:3787500* | 3787500 | 3816375 | 28876 | Bacillus cereus G9842, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_003228:4449072* | 4449072 | 4467932 | 18861 | Bacteroides fragilis NCTC 9343, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_006347:4562242* | 4562242 | 4581936 | 19695 | Bacteroides fragilis YCH46, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_013895:1086500* | 1086500 | 1108481 | 21982 | Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_012563:2721658* | 2721658 | 2741758 | 20101 | Clostridium botulinum A2 str. Kyoto, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_014328:1379437* | 1379437 | 1402099 | 22663 | Clostridium ljungdahlii ATCC 49587 chromosome, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_010001:4703500 | 4703500 | 4726538 | 23039 | Clostridium phytofermentans ISDg, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_012778:841934* | 841934 | 890075 | 48142 | Eubacterium eligens ATCC 27750, complete genome | 5e-100 | 373 | BLASTN svg | BLASTP svg |
NC_012440:197728* | 197728 | 221233 | 23506 | Persephonella marina EX-H1, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_010003:2029416* | 2029416 | 2053890 | 24475 | Petrotoga mobilis SJ95, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_012633:98000* | 98000 | 120099 | 22100 | Rickettsia africae ESF-5, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_009881:92929* | 92929 | 119903 | 26975 | Rickettsia akari str. Hartford, complete genome | 2e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_000963:83408* | 83408 | 106099 | 22692 | Rickettsia prowazekii str. Madrid E, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_009882:100000* | 100000 | 122099 | 22100 | Rickettsia rickettsii str. 'Sheila Smith', complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_010263:100000* | 100000 | 122099 | 22100 | Rickettsia rickettsii str. Iowa, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_004461:921364* | 921364 | 958758 | 37395 | Staphylococcus epidermidis ATCC 12228, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_007168:1705763* | 1705763 | 1724691 | 18929 | Staphylococcus haemolyticus JCSC1435, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_004116:1827351* | 1827351 | 1855565 | 28215 | Streptococcus agalactiae 2603V/R, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_009785:2049395* | 2049395 | 2075599 | 26205 | Streptococcus gordonii str. Challis substr. CH1, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_015678:1443178* | 1443178 | 1469761 | 26584 | Streptococcus parasanguinis ATCC 15912 chromosome, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_007296:1762000* | 1762000 | 1784290 | 22291 | Streptococcus pyogenes MGAS6180, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_015760:61345* | 61345 | 86293 | 24949 | Streptococcus salivarius CCHSS3, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_006448:59654* | 59654 | 84865 | 25212 | Streptococcus thermophilus LMG 18311, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_014377:1227850* | 1227850 | 1270234 | 42385 | Thermosediminibacter oceani DSM 16646 chromosome, complete genome | 2e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_000853:771746* | 771746 | 798601 | 26856 | Thermotoga maritima MSB8, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_013642:545464* | 545464 | 572304 | 26841 | Thermotoga naphthophila RKU-10, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |